RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 NIPSNAP2O75323 286 aa18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 BANF1O75531 89 aa18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 NTRK1P04629 796 aa18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 MLNP12872 115 aa18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 UGT2B7P16662 529 aa18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 PAMP19021 973 aa18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 RPS3P23396 243 aaKnown RBP eCLIP18.31■□□□□ 0.523e-6■■■■□ 21.8
LPCAT1-206ENST00000514484 DLSTP36957 453 aa18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 MAGEA3P43357 314 aa18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 TUBB4BP68371 445 aa18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 TUBB2AQ13885 445 aa18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 COL9A2Q14055 689 aaPredicted RBP18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 MAP7Q14244 749 aa18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 LINC00303Q3SY05 128 aa18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 ANKRD20A4Q4UJ75 823 aa18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 ZNF789Q5FWF6 425 aa18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 RNASEH2BQ5TBB1 312 aaKnown RBP18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 PRAMEF17Q5VTA0 474 aa18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 ZNF470Q6ECI4 717 aa18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 CYB5D1Q6P9G0 228 aa18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 SPESP1Q6UW49 350 aa18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 PPIL6Q8IXY8 311 aa18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 STARD8Q92502 1023 aa18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 ZNF501Q96CX3 271 aaPredicted RBP18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 BIRC8Q96P09 236 aa18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 PANX3Q96QZ0 392 aa18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 TUBB2BQ9BVA1 445 aa18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 PITPNM3Q9BZ71 974 aa18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 POLG2Q9UHN1 485 aa18.31■□□□□ 0.52
LPCAT1-206ENST00000514484 PCM1Q15154 2024 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 FAM237BA0A1B0GVD1 139 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 KRT87PA6NCN2 255 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 ZNF891A8MT65 544 aaPredicted RBP18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 TK2O00142 265 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 NKX2-8O15522 239 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 CHRM5P08912 532 aaPredicted RBP18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 OGNP20774 298 aaKnown RBP18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 PEBP1P30086 187 aaKnown RBP18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 BDKRB1P46663 353 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 PTK6Q13882 451 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 TBR1Q16650 682 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 DNAJC21Q5F1R6 531 aaKnown RBP18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 TMTC4Q5T4D3 741 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 ATP1A1-AS1Q5TC04 95 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 NEPROQ6NW34 567 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 CENPUQ71F23 418 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 OTOAQ7RTW8 1153 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 SDCCAG8Q86SQ7 713 aaPredicted RBP18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 TAX1BP1Q86VP1 789 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 LRRC6Q86X45 466 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 CILP2Q8IUL8 1156 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 TMEM126BQ8IUX1 230 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 SPNS2Q8IVW8 549 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 FAM20CQ8IXL6 584 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 KLHL7Q8IXQ5 586 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 CARFQ8N187 725 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 C2orf73Q8N5S3 287 aaPredicted RBP18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 LSM14AQ8ND56 463 aaKnown RBP18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 SKA2Q8WVK7 121 aaPredicted RBP18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 SLC45A3Q96JT2 553 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 IL17FQ96PD4 163 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 TRAPPC9Q96Q05 1148 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 NAPGQ99747 312 aaPredicted RBP18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 NFS1Q9Y697 457 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 ANKRD12Q6UB98 2062 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 CCDC88CQ9P219 2028 aa18.3■□□□□ 0.52
LPCAT1-206ENST00000514484 ZCWPW2A0A1B0GU75 182 aa18.29■□□□□ 0.52
LPCAT1-206ENST00000514484 TMEM150CB9EJG8 249 aa18.29■□□□□ 0.52
LPCAT1-206ENST00000514484 SLCO2B1O94956 709 aa18.29■□□□□ 0.52
LPCAT1-206ENST00000514484 FAM87AP0C7U9 286 aa18.29■□□□□ 0.52
LPCAT1-206ENST00000514484 PKLRP30613 574 aa18.29■□□□□ 0.52
LPCAT1-206ENST00000514484 PTGIRP43119 386 aa18.29■□□□□ 0.52
LPCAT1-206ENST00000514484 DEFB110Q30KQ9 67 aa18.29■□□□□ 0.52
LPCAT1-206ENST00000514484 RNF187Q5TA31 235 aaPredicted RBP18.29■□□□□ 0.52
LPCAT1-206ENST00000514484 PAPD7Q5XG87 772 aaKnown RBP18.29■□□□□ 0.52
LPCAT1-206ENST00000514484 CREG2Q8IUH2 290 aa18.29■□□□□ 0.52
LPCAT1-206ENST00000514484 DCUN1D3Q8IWE4 304 aa18.29■□□□□ 0.52
LPCAT1-206ENST00000514484 DENND6AQ8IWF6 608 aa18.29■□□□□ 0.52
LPCAT1-206ENST00000514484 ZNF843Q8N446 348 aa18.29■□□□□ 0.52
LPCAT1-206ENST00000514484 EXD3Q8N9H8 876 aa18.29■□□□□ 0.52
LPCAT1-206ENST00000514484 FLVCR1-AS1Q8TAF5 88 aa18.29■□□□□ 0.52
LPCAT1-206ENST00000514484 CT55Q8WUE5 264 aa18.29■□□□□ 0.52
LPCAT1-206ENST00000514484 WBP1Q96G27 269 aa18.29■□□□□ 0.52
LPCAT1-206ENST00000514484 OR2A14Q96R47 310 aa18.29■□□□□ 0.52
LPCAT1-206ENST00000514484 RUFY1Q96T51 708 aa18.29■□□□□ 0.52
LPCAT1-206ENST00000514484 ARHGAP9Q9BRR9 750 aa18.29■□□□□ 0.52
LPCAT1-206ENST00000514484 AKIRIN1Q9H9L7 192 aaPredicted RBP18.29■□□□□ 0.52
LPCAT1-206ENST00000514484 FBXO6Q9NRD1 293 aaPredicted RBP18.29■□□□□ 0.52
LPCAT1-206ENST00000514484 GALPQ9UBC7 116 aa18.29■□□□□ 0.52
LPCAT1-206ENST00000514484 DNALI1O14645 258 aaPredicted RBP18.28■□□□□ 0.52
LPCAT1-206ENST00000514484 SCRG1O75711 98 aa18.28■□□□□ 0.52
LPCAT1-206ENST00000514484 ITGB2P05107 769 aa18.28■□□□□ 0.52
LPCAT1-206ENST00000514484 OAS2P29728 719 aaKnown RBP18.28■□□□□ 0.52
LPCAT1-206ENST00000514484 SLC1A2P43004 574 aa18.28■□□□□ 0.52
LPCAT1-206ENST00000514484 CDC20Q12834 499 aa18.28■□□□□ 0.52
LPCAT1-206ENST00000514484 CTBP1Q13363 440 aa18.28■□□□□ 0.52
LPCAT1-206ENST00000514484 ZIC1Q15915 447 aa18.28■□□□□ 0.52
LPCAT1-206ENST00000514484 IZUMO3Q5VZ72 239 aa18.28■□□□□ 0.52
LPCAT1-206ENST00000514484 C16orf46Q6P387 395 aa18.28■□□□□ 0.52
LPCAT1-206ENST00000514484 FAM199XQ6PEV8 388 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms