RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 PRAG1Q86YV5 1406 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 RRBP1Q9P2E9 1410 aaKnown RBP3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 MTUS2Q5JR59 1369 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 DHX57Q6P158 1386 aaKnown RBP3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 CLSPNQ9HAW4 1339 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 SDR42E2A6NKP2 422 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 YDJCA8MPS7 323 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 BECN2A8MW95 431 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 PLK4O00444 970 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 KINO60870 393 aaKnown RBP3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 SERPINI2O75830 405 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 PTMAP06454 111 aaKnown RBP3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 SNRNP70P08621 437 aaKnown RBP3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 IGHV4-30-4P0DP06 118 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 SAGP10523 405 aaPredicted RBP3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 DAOP14920 347 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 ACAT1P24752 427 aaKnown RBP3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 CRKLP46109 303 aaKnown RBP3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 RFX5P48382 616 aaPredicted RBP3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 LHX1P48742 406 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 CLK1P49759 484 aaKnown RBP3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 KHKP50053 298 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 DSCR9P59020 149 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 ARF5P84085 180 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 PDE1BQ01064 536 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 ACTN3Q08043 901 aaPredicted RBP3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 AP1B1Q10567 949 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 GPS2Q13227 327 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 SMC1AQ14683 1233 aaKnown RBP3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 NFATC4Q14934 902 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 KBTBD12Q3ZCT8 623 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 TTC31Q49AM3 519 aaPredicted RBP3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 TDRD12Q587J7 1177 aaKnown RBP3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 TRNP1Q6NT89 227 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 ALKBH5Q6P6C2 394 aaKnown RBP3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 ENPP7Q6UWV6 458 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 LINGO4Q6UY18 593 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 SIAH3Q8IW03 269 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 PRR26Q8N8Z3 221 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 ACVR1CQ8NER5 493 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 OR5R1Q8NH85 324 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 OR14A16Q8NHC5 309 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 PSMA8Q8TAA3 256 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 SMPDL3BQ92485 455 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 RAD54LQ92698 747 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 NEUROG1Q92886 237 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 ATP6V0A1Q93050 837 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 PDLIM5Q96HC4 596 aaKnown RBP3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 TXNDC15Q96J42 360 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 DUX5Q96PT3 197 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 MTERF1Q99551 399 aaKnown RBP3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 CMKLR1Q99788 373 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 KATNB1Q9BVA0 655 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 ZNF350Q9GZX5 532 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 TXLNGQ9NUQ3 528 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 DNAJC17Q9NVM6 304 aaKnown RBP3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 C1RLQ9NZP8 487 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 TBC1D7Q9P0N9 293 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 RHCGQ9UBD6 479 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 PADI2Q9Y2J8 665 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 AMDHD2Q9Y303 409 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 YIPF1Q9Y548 306 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 EFCAB5A4FU69 1503 aa3.28□□□□□ -1.88
CALCOCO2-223ENST00000514267 SETD5Q9C0A6 1442 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 RAB3GAP2Q9H2M9 1393 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 KIF21AQ7Z4S6 1674 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 CTTNBP2Q8WZ74 1663 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 PCF11O94913 1555 aaKnown RBP3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 PRSS51A0A1B0GVH4 220 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 hDV102S1A0JD36 115 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 ELOVL7A1L3X0 281 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 NEMP2A6NFY4 417 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 LILRA5A6NI73 299 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 PRR32B1ATL7 298 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 ZBTB14O43829 449 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 GPR137BO60478 399 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 KERAO60938 352 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 LUC7L3O95232 432 aaKnown RBP3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 RLN1P04808 185 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 CSN3P07498 182 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 ACAA1P09110 424 aaPredicted RBP3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 FCGR1AP12314 374 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 CALRP27797 417 aaKnown RBP3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 SLC6A6P31641 620 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 ST8SIA6P61647 398 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 POLR2LP62875 67 aaKnown RBP3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 DLK1P80370 383 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 RPL36AP83881 106 aaKnown RBP3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 TROAPQ12815 778 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 PLA2G7Q13093 441 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 RCN2Q14257 317 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 PKN2Q16513 984 aaKnown RBP3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 GRTP1Q5TC63 336 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 TXNRD3NBQ6F5E7 133 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 MFSD12Q6NUT3 480 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 WDR73Q6P4I2 378 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 TMPRSS11FQ6ZWK6 438 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 CREB3L2Q70SY1 520 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 GET4Q7L5D6 327 aaPredicted RBP3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 MAP7D3Q8IWC1 876 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms