RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	MTCP1	P56278	107 aa		4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	DHX34	Q14147	1143 aa	Known RBP	4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	HFE	Q30201	348 aa		4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	TMEM35A	Q53FP2	167 aa		4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	GRTP1	Q5TC63	336 aa		4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	FAM122C	Q6P4D5	195 aa		4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	ZNF704	Q6ZNC4	412 aa	Predicted RBP	4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	ARHGAP22	Q7Z5H3	698 aa		4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	PIGW	Q7Z7B1	504 aa		4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	COMMD2	Q86X83	199 aa		4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	SIAH3	Q8IW03	269 aa		4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	CCDC83	Q8IWF9	413 aa		4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	GBGT1	Q8N5D6	347 aa		4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	PPFIBP2	Q8ND30	876 aa		4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	VANGL1	Q8TAA9	524 aa	Predicted RBP	4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	UBLCP1	Q8WVY7	318 aa	Predicted RBP	4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	PHF21A	Q96BD5	680 aa		4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	C3orf30	Q96M34	536 aa		4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	GAL3ST4	Q96RP7	486 aa		4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006		Q9N2K0	584 aa		4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	DNAJC4	Q9NNZ3	241 aa		4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	ZBTB40	Q9NUA8	1239 aa		4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	ANO10	Q9NW15	660 aa		4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	SLCO1C1	Q9NYB5	712 aa		4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	TXNDC16	Q9P2K2	825 aa		4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	IL19	Q9UHD0	177 aa		4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	CHKB	Q9Y259	395 aa		4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	ITM2B	Q9Y287	266 aa		4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	MTF2	Q9Y483	593 aa	Predicted RBP	4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	INSL5	Q9Y5Q6	135 aa		4.78	□□□□□ -1.64
CALCOCO2-222	ENST00000514006	MED19	A0JLT2	244 aa	Predicted RBP	4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	SYCE3	A1L190	88 aa		4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	KBTBD13	C9JR72	458 aa		4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	TNFRSF13B	O14836	293 aa	Predicted RBP	4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	STAM2	O75886	525 aa		4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	BCAS2	O75934	225 aa	Predicted RBP	4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	PLG	P00747	810 aa	Predicted RBP	4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	C8orf89	P0DMQ9	161 aa		4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	SLC6A6	P31641	620 aa		4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	CD86	P42081	329 aa		4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	TMPO	P42166	694 aa	Known RBP	4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	KRTAP10-2	P60368	255 aa		4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	FOLH1	Q04609	750 aa		4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	SGCB	Q16585	318 aa		4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	XKR9	Q5GH70	373 aa		4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	MORN5	Q5VZ52	161 aa		4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	CYB5D1	Q6P9G0	228 aa		4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	ZNF517	Q6ZMY9	492 aa	Predicted RBP	4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	RNF113B	Q8IZP6	322 aa	Known RBP	4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	RYBP	Q8N488	228 aa	Predicted RBP	4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	TEX9	Q8N6V9	391 aa		4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	BCL2L2	Q92843	193 aa	Predicted RBP	4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	SNRNP40	Q96DI7	357 aa	Known RBP	4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	OR1F2P	Q96R84	312 aa		4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	RAD9A	Q99638	391 aa		4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	DCLK3	Q9C098	648 aa		4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	RBM38	Q9H0Z9	239 aa	Known RBP	4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	ABCG8	Q9H221	673 aa		4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	SNX25	Q9H3E2	840 aa		4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	EBF3	Q9H4W6	596 aa		4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	RNPEPL1	Q9HAU8	725 aa		4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	TCP11L1	Q9NUJ3	509 aa		4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	COMMD8	Q9NX08	183 aa		4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	CYP39A1	Q9NYL5	469 aa		4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	SPG21	Q9NZD8	308 aa		4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	HOOK1	Q9UJC3	728 aa	Known RBP	4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	TTC3	P53804	2025 aa		4.77	□□□□□ -1.65
CALCOCO2-222	ENST00000514006		A0A0A6YYC8	382 aa	Predicted RBP	4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	LINC01553	A4QN01	128 aa		4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006		I3L1I5	382 aa	Predicted RBP	4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	CAPN9	O14815	690 aa		4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	CTDSPL	O15194	276 aa		4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	FLRT2	O43155	660 aa		4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	VEGFD	O43915	354 aa		4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	WISP2	O76076	250 aa		4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	DDHD2	O94830	711 aa		4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	SLC4A1	P02730	911 aa		4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	C9	P02748	559 aa		4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	H1F0	P07305	194 aa	Known RBP	4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	SMIM18	P0DKX4	95 aa		4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	HOXB2	P14652	356 aa		4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	VCL	P18206	1134 aa		4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	EPOR	P19235	508 aa		4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	PTGER4	P35408	488 aa		4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	EVC	P57679	992 aa		4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	STARD6	P59095	220 aa		4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	TGFB2	P61812	414 aa		4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	ABAT	P80404	500 aa		4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	MAT1A	Q00266	395 aa	Known RBP	4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	PRKAA1	Q13131	559 aa		4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	VEZF1	Q14119	521 aa		4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	EZH2	Q15910	746 aa	Known RBP	4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	CTU2	Q2VPK5	515 aa	Known RBP	4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	MCMDC2	Q4G0Z9	681 aa		4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	AARD	Q4LEZ3	155 aa		4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	SETMAR	Q53H47	684 aa	Predicted RBP	4.76	□□□□□ -1.65
CALCOCO2-222	ENST00000514006	LACTB2	Q53H82	288 aa	Predicted RBP	4.76	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms