RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 FBXO15Q8NCQ5 510 aaPredicted RBP12.52□□□□□ -0.4
PVT1-203ENST00000513868 RP9Q8TA86 221 aaKnown RBP12.52□□□□□ -0.4
PVT1-203ENST00000513868 ASB12Q8WXK4 309 aa12.52□□□□□ -0.4
PVT1-203ENST00000513868 ATP6V1E2Q96A05 226 aa12.52□□□□□ -0.4
PVT1-203ENST00000513868 PYCR2Q96C36 320 aa12.52□□□□□ -0.4
PVT1-203ENST00000513868 GUCD1Q96NT3 240 aa12.52□□□□□ -0.4
PVT1-203ENST00000513868 RAB3IPQ96QF0 476 aaPredicted RBP12.52□□□□□ -0.4
PVT1-203ENST00000513868 PKP4Q99569 1192 aa12.52□□□□□ -0.4
PVT1-203ENST00000513868 OR52A5Q9H2C5 316 aa12.52□□□□□ -0.4
PVT1-203ENST00000513868 WDR26Q9H7D7 661 aa12.52□□□□□ -0.4
PVT1-203ENST00000513868 TM7SF3Q9NS93 570 aa12.52□□□□□ -0.4
PVT1-203ENST00000513868 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.52□□□□□ -0.4
PVT1-203ENST00000513868 RNF11Q9Y3C5 154 aa12.52□□□□□ -0.4
PVT1-203ENST00000513868 ANGPTL3Q9Y5C1 460 aa12.52□□□□□ -0.4
PVT1-203ENST00000513868 A8MUI8 341 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 C10orf142B7Z368 130 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 PRAMEF4O60810 478 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 VPS4BO75351 444 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 WDR47O94967 919 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 CHEK2O96017 543 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 CATP04040 527 aaKnown RBP12.51□□□□□ -0.41
PVT1-203ENST00000513868 EBLN1P0CF75 366 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 THRAP10827 490 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 CHRNB1P11230 501 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 HGFP14210 728 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 MAT2AP31153 395 aaKnown RBP12.51□□□□□ -0.41
PVT1-203ENST00000513868 ACSL1P33121 698 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 PIK3CGP48736 1102 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 ATP4BP51164 291 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 TPMTP51580 245 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 MNAT1P51948 309 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 SQLEQ14534 574 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 HERC3Q15034 1050 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 PRAMEF9Q5VWM5 478 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 PTCRAQ6ISU1 281 aaPredicted RBP12.51□□□□□ -0.41
PVT1-203ENST00000513868 OGFOD2Q6N063 350 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 Q6ZS52 159 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 LRRTM4Q86VH4 590 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 SNX32Q86XE0 403 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 KLHDC8AQ8IYD2 350 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 CHCHD4Q8N4Q1 142 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 TUBGCP3Q96CW5 907 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 CCDC138Q96M89 665 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 CCT7Q99832 543 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 RTKNQ9BST9 563 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 ZDHHC5Q9C0B5 715 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 ATG10Q9H0Y0 220 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 DPEP2Q9H4A9 486 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 STOX2Q9P2F5 926 aaPredicted RBP12.51□□□□□ -0.41
PVT1-203ENST00000513868 TRPS1Q9UHF7 1281 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 NDRG2Q9UN36 371 aaKnown RBP12.51□□□□□ -0.41
PVT1-203ENST00000513868 SLC22A14Q9Y267 594 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 NCKAP1Q9Y2A7 1128 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 CCL27Q9Y4X3 112 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 DNMT3AQ9Y6K1 912 aaPredicted RBP12.51□□□□□ -0.41
PVT1-203ENST00000513868 FANCMQ8IYD8 2048 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 TCRBV21S2A2A0A5A6 115 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 MYCLP1P12525 358 aaPredicted RBP12.51□□□□□ -0.41
PVT1-203ENST00000513868 IL9P15248 144 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 LBPP18428 481 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 GPX3P22352 226 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 MAP4P27816 1152 aaKnown RBP12.51□□□□□ -0.41
PVT1-203ENST00000513868 IMPA1P29218 277 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 SLC25A3Q00325 362 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 PLOD1Q02809 727 aaPredicted RBP12.51□□□□□ -0.41
PVT1-203ENST00000513868 ABRAXAS2Q15018 415 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 MLF2Q15773 248 aaPredicted RBP12.51□□□□□ -0.41
PVT1-203ENST00000513868 AGTRAPQ6RW13 159 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 KIAA1324Q6UXG2 1013 aaKnown RBP12.51□□□□□ -0.41
PVT1-203ENST00000513868 RNF165Q6ZSG1 346 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 AMZ2Q86W34 360 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 SFRP1Q8N474 314 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 FAM13CQ8NE31 585 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 SPDYE1Q8NFV5 336 aaPredicted RBP12.51□□□□□ -0.41
PVT1-203ENST00000513868 FZD3Q9NPG1 666 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 PHPT1Q9NRX4 125 aaPredicted RBP12.51□□□□□ -0.41
PVT1-203ENST00000513868 INTS7Q9NVH2 962 aaKnown RBP12.51□□□□□ -0.41
PVT1-203ENST00000513868 EBF1Q9UH73 591 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 CIDEBQ9UHD4 219 aa12.51□□□□□ -0.41
PVT1-203ENST00000513868 KCNE1BA0A087WTH5 132 aa12.5□□□□□ -0.41
PVT1-203ENST00000513868 GPR89AB7ZAQ6 455 aa12.5□□□□□ -0.41
PVT1-203ENST00000513868 PSMD12O00232 456 aaPredicted RBP12.5□□□□□ -0.41
PVT1-203ENST00000513868 MAN2B1O00754 1011 aa12.5□□□□□ -0.41
PVT1-203ENST00000513868 SLC31A1O15431 190 aa12.5□□□□□ -0.41
PVT1-203ENST00000513868 PEX11AO75192 247 aa12.5□□□□□ -0.41
PVT1-203ENST00000513868 CLDN9O95484 217 aa12.5□□□□□ -0.41
PVT1-203ENST00000513868 SLC16A8O95907 504 aa12.5□□□□□ -0.41
PVT1-203ENST00000513868 CEACAM5P06731 702 aa12.5□□□□□ -0.41
PVT1-203ENST00000513868 GPR89BP0CG08 455 aa12.5□□□□□ -0.41
PVT1-203ENST00000513868 ACADMP11310 421 aa12.5□□□□□ -0.41
PVT1-203ENST00000513868 ITGAXP20702 1163 aa12.5□□□□□ -0.41
PVT1-203ENST00000513868 ITPKAP23677 461 aa12.5□□□□□ -0.41
PVT1-203ENST00000513868 HMOX2P30519 316 aa12.5□□□□□ -0.41
PVT1-203ENST00000513868 ARL1P40616 181 aaPredicted RBP12.5□□□□□ -0.41
PVT1-203ENST00000513868 CCR3P51677 355 aa12.5□□□□□ -0.41
PVT1-203ENST00000513868 TFF2Q03403 129 aa12.5□□□□□ -0.41
PVT1-203ENST00000513868 RPA4Q13156 261 aa12.5□□□□□ -0.41
PVT1-203ENST00000513868 CYLC2Q14093 348 aaPredicted RBP12.5□□□□□ -0.41
PVT1-203ENST00000513868 FASTKQ14296 549 aaKnown RBP12.5□□□□□ -0.41
PVT1-203ENST00000513868 TMEM31Q5JXX7 168 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms