RNA–Protein interactions for RNA: ENST00000512847.1

ALPK1-215, Transcript of alpha kinase 1, human

TSL 3

Gene ALPK1, Length 580 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ALPK1-215	ENST00000512847	TSPAN7	P41732	249 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	LEPR	P48357	1165 aa	Known RBP	10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	CD151	P48509	253 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	TTPA	P49638	278 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	TLE3	Q04726	772 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	RPA4	Q13156	261 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	PTK6	Q13882	451 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	TMEM164	Q5U3C3	297 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	ARMC3	Q5W041	872 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	CASC4	Q6P4E1	433 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	LDB1	Q86U70	411 aa	Predicted RBP	10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	FAM129C	Q86XR2	697 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	DMRTC2	Q8IXT2	367 aa	Predicted RBP	10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	MPP5	Q8N3R9	675 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847		Q8N3U1	123 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	BMPER	Q8N8U9	685 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	NAT8L	Q8N9F0	302 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	ZFPM2	Q8WW38	1151 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	ELMO1	Q92556	727 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	SLCO2A1	Q92959	643 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	PMEPA1	Q969W9	287 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	C9orf72	Q96LT7	481 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	SERPINB12	Q96P63	405 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	TAAR9	Q96RI9	348 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	DPH1	Q9BZG8	443 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	B3GNT4	Q9C0J1	378 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	RAB33B	Q9H082	229 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	KIR3DX1	Q9H7L2	352 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	XAB2	Q9HCS7	855 aa	Known RBP	10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	FOXJ2	Q9P0K8	574 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	SAMD15	Q9P1V8	674 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	ZFAT	Q9P243	1243 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	PCYOX1	Q9UHG3	505 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	SLC24A2	Q9UI40	661 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	ACSL6	Q9UKU0	697 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	HEBP2	Q9Y5Z4	205 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	COLEC10	Q9Y6Z7	277 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	PCM1	Q15154	2024 aa		10.84	□□□□□ -0.67
ALPK1-215	ENST00000512847	SMG1	Q96Q15	3661 aa	Known RBP	10.83	□□□□□ -0.67
ALPK1-215	ENST00000512847	SDR42E2	A6NKP2	422 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847		F8W8V4	182 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	IFRD1	O00458	451 aa	Predicted RBP	10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	DNALI1	O14645	258 aa	Predicted RBP	10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	TOX3	O15405	576 aa	Predicted RBP	10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	KIF1C	O43896	1103 aa	Known RBP	10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	VAPB	O95292	243 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	ARNT	P27540	789 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	NDUFS1	P28331	727 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	SOX18	P35713	384 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	PPP1CA	P62136	330 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	PLAUR	Q03405	335 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	BOP1	Q14137	746 aa	Known RBP	10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	KRT33B	Q14525	404 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	BRD3	Q15059	726 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	SYTL3	Q4VX76	610 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	RNASEH2B	Q5TBB1	312 aa	Known RBP	10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	BROX	Q5VW32	411 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	KIAA0930	Q6ICG6	404 aa	Predicted RBP	10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	IRGC	Q6NXR0	463 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	C16orf46	Q6P387	395 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	KLHL35	Q6PF15	583 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	NAPRT	Q6XQN6	538 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	FAM92B	Q6ZTR7	304 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	PRSS42	Q7Z5A4	293 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	PDZD3	Q86UT5	571 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	PPIL6	Q8IXY8	311 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	C17orf53	Q8N3J3	647 aa	Predicted RBP	10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	OTUD6B	Q8N6M0	293 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	ART4	Q93070	314 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	ZDHHC12	Q96GR4	267 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	CRELD1	Q96HD1	420 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	FERD3L	Q96RJ6	166 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	TRIM56	Q9BRZ2	755 aa	Known RBP	10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	KCND1	Q9NSA2	647 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	SLC39A1	Q9NY26	324 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	EPHA6	Q9UF33	1036 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	ASIC3	Q9UHC3	531 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	PCDHGA3	Q9Y5H0	932 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	KALRN	O60229	2985 aa		10.83	□□□□□ -0.68
ALPK1-215	ENST00000512847	SPTB	P11277	2137 aa		10.82	□□□□□ -0.68
ALPK1-215	ENST00000512847	FAM237B	A0A1B0GVD1	139 aa		10.82	□□□□□ -0.68
ALPK1-215	ENST00000512847	SLC5A10	A0PJK1	596 aa		10.82	□□□□□ -0.68
ALPK1-215	ENST00000512847	OR5K3	A6NET4	321 aa		10.82	□□□□□ -0.68
ALPK1-215	ENST00000512847	GOLGA8K	D6RF30	607 aa		10.82	□□□□□ -0.68
ALPK1-215	ENST00000512847	GOLGA8T	H3BQL2	631 aa		10.82	□□□□□ -0.68
ALPK1-215	ENST00000512847	PRMT5	O14744	637 aa	Predicted RBP	10.82	□□□□□ -0.68
ALPK1-215	ENST00000512847	NDUFS3	O75489	264 aa		10.82	□□□□□ -0.68
ALPK1-215	ENST00000512847	RASSF9	O75901	435 aa		10.82	□□□□□ -0.68
ALPK1-215	ENST00000512847	H2AFB1	P0C5Y9	115 aa		10.82	□□□□□ -0.68
ALPK1-215	ENST00000512847	H2AFB2	P0C5Z0	115 aa		10.82	□□□□□ -0.68
ALPK1-215	ENST00000512847	LIPC	P11150	499 aa		10.82	□□□□□ -0.68
ALPK1-215	ENST00000512847	ITGB6	P18564	788 aa		10.82	□□□□□ -0.68
ALPK1-215	ENST00000512847	PAM	P19021	973 aa		10.82	□□□□□ -0.68
ALPK1-215	ENST00000512847	CD82	P27701	267 aa		10.82	□□□□□ -0.68
ALPK1-215	ENST00000512847	PAFAH1B1	P43034	410 aa		10.82	□□□□□ -0.68
ALPK1-215	ENST00000512847	MAGEA3	P43357	314 aa		10.82	□□□□□ -0.68
ALPK1-215	ENST00000512847	ARCN1	P48444	511 aa	Known RBP	10.82	□□□□□ -0.68
ALPK1-215	ENST00000512847	SEPHS1	P49903	392 aa		10.82	□□□□□ -0.68
ALPK1-215	ENST00000512847	MC2R	Q01718	297 aa		10.82	□□□□□ -0.68
ALPK1-215	ENST00000512847	PLOD1	Q02809	727 aa	Predicted RBP	10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms