RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 KCNH3Q9ULD8 1083 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 SAMHD1Q9Y3Z3 626 aaKnown RBP4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 LIPGQ9Y5X9 500 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 MAU2Q9Y6X3 613 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 TRIOBPQ9H2D6 2365 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 ARHGEF35A5YM69 484 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 A8MX80 341 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 KMOO15229 486 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 EFSO43281 561 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 GATCO43716 136 aaKnown RBP4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 TLX2O43763 284 aaPredicted RBP4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 TBX19O60806 448 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 VPS4BO75351 444 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 NME6O75414 186 aaPredicted RBP4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 CLEC3AO75596 197 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 SERPINI2O75830 405 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 ARHGEF15O94989 841 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 ZIC2O95409 532 aaPredicted RBP4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 GBAP04062 536 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 EIF2S1P05198 315 aaKnown RBP4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 ENO1P06733 434 aaKnown RBP4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 CHRM5P08912 532 aaPredicted RBP4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 FAM58BPP0C7Q3 252 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 SRCP12931 536 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 ATP6V1C1P21283 382 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 SPAM1P38567 509 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 SLC1A6P48664 564 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 CEBPDP49716 269 aaPredicted RBP4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 JAK3P52333 1124 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 HK3P52790 923 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 MANFP55145 182 aaKnown RBP4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 GSTM4Q03013 218 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 PCDH1Q08174 1060 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 DMP1Q13316 513 aaPredicted RBP4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 UBAP2LQ14157 1087 aaKnown RBP4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 FAM189A2Q15884 450 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 EPC2Q52LR7 807 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 PDCD4Q53EL6 469 aaKnown RBP4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 KHDC1LQ5JSQ8 128 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 COLEC12Q5KU26 742 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 ZNF697Q5TEC3 545 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 FAM122CQ6P4D5 195 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 RBPMS2Q6ZRY4 209 aaKnown RBP4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 ANO5Q75V66 913 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 VASH1Q7L8A9 365 aaPredicted RBP4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 ADAMTSL2Q86TH1 951 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 PROSER1Q86XN7 944 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 ZDHHC21Q8IVQ6 265 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 FAM126BQ8IXS8 530 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 CLEC4FQ8N1N0 589 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 C4orf32Q8N8J7 132 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 OR7G3Q8NG95 312 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 DNAJB3Q8WWF6 145 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 SNX19Q92543 992 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 TMEM186Q96B77 213 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 SLC41A2Q96JW4 573 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 EGLN2Q96KS0 407 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 SEMA4CQ9C0C4 833 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 MKRN2Q9H000 416 aaKnown RBP4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 PCDHAC1Q9H158 963 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 TPK1Q9H3S4 243 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 FBXO44Q9H4M3 255 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 UNKLQ9H9P5 680 aaKnown RBP4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 PLEKHA2Q9HB19 425 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 THAP1Q9NVV9 213 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 FAM118AQ9NWS6 357 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 CLEC5AQ9NY25 188 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 TRIM10Q9UDY6 481 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 TRMT6Q9UJA5 497 aaKnown RBP4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 USP18Q9UMW8 372 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 IFT52Q9Y366 437 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 RNF215Q9Y6U7 377 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 A0A0C4DFX4 3053 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 CHD9Q3L8U1 2897 aa4.93□□□□□ -1.62
TRAPPC11-208ENST00000511955 RAB19A4D1S5 217 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 DFNA5O60443 496 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 PFDN1O60925 122 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 CSDE1O75534 798 aaKnown RBP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 KRT36O76013 467 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 CCNB2O95067 398 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 RAB3DO95716 219 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 IQCF3P0C7M6 154 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 KRT15P19012 456 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 CD247P20963 164 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 ZNF10P21506 573 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 KLRC1P26715 233 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 QARSP47897 775 aaKnown RBP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 SERPINB9P50453 376 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 CLCN3P51790 818 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 SNU13P55769 128 aaKnown RBP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 MXRA7P84157 204 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 SULT2A1Q06520 285 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 SCRN3Q0VDG4 424 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 PMS2P3Q13401 168 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 TUSC3Q13454 348 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 P3H1Q32P28 736 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 KLHL26Q53HC5 615 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 CDKL4Q5MAI5 379 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 ZBTB37Q5TC79 503 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms