RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 FBLP22087 321 aaKnown RBP5.02□□□□□ -1.61
PHF3-210ENST00000509876 DNAJB1P25685 340 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 PSMA4P25789 261 aaKnown RBP5.02□□□□□ -1.61
PHF3-210ENST00000509876 E2F1Q01094 437 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 SMAD2Q15796 467 aaKnown RBP5.02□□□□□ -1.61
PHF3-210ENST00000509876 GSTA3Q16772 222 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 ZNF648Q5T619 568 aaPredicted RBP5.02□□□□□ -1.61
PHF3-210ENST00000509876 C9orf64Q5T6V5 341 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 KRT80Q6KB66 452 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 ADGRD1Q6QNK2 874 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 C10orf107Q8IVU9 208 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 PRSS58Q8IYP2 241 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 ZNF75CPQ92670 426 aaPredicted RBP5.02□□□□□ -1.61
PHF3-210ENST00000509876 GFM2Q969S9 779 aaKnown RBP5.02□□□□□ -1.61
PHF3-210ENST00000509876 ERP27Q96DN0 273 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 FBRSL1Q9HCM7 1045 aaKnown RBP5.02□□□□□ -1.61
PHF3-210ENST00000509876 PNO1Q9NRX1 252 aaKnown RBP5.02□□□□□ -1.61
PHF3-210ENST00000509876 EPHA6Q9UF33 1036 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 FETUBQ9UGM5 382 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 RAPGEFL1Q9UHV5 662 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 PLAGL1Q9UM63 463 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 LOC100653049A0A140TA62 436 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 AQP9O43315 295 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 KRT34O76011 436 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 MATN4O95460 622 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 ZNF682O95780 498 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 BPIP17213 487 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 GYS2P54840 703 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 CDK3Q00526 305 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 NIPAL4Q0D2K0 466 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 ELOAQ14241 798 aaKnown RBP5.02□□□□□ -1.61
PHF3-210ENST00000509876 SLBPQ14493 270 aaKnown RBP eCLIP5.02□□□□□ -1.61
PHF3-210ENST00000509876 HEPACAMQ14CZ8 416 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 COLEC12Q5KU26 742 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 MCEMP1Q8IX19 187 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 LRRC34Q8IZ02 419 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 SMRP1Q8NCR6 262 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 C2CD4AQ8NCU7 369 aaPredicted RBP5.02□□□□□ -1.61
PHF3-210ENST00000509876 DEPDC7Q96QD5 511 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 MYCBPQ99417 103 aaPredicted RBP5.02□□□□□ -1.61
PHF3-210ENST00000509876 CDC6Q99741 560 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 PRRG3Q9BZD7 231 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 EPB41L1Q9H4G0 881 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 HPS4Q9NQG7 708 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 ZSCAN32Q9NX65 697 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 TAGLN3Q9UI15 199 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 PHF11Q9UIL8 331 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 CFL2Q9Y281 166 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 POLR3HQ9Y535 204 aaPredicted RBP5.02□□□□□ -1.61
PHF3-210ENST00000509876 TLR4O00206 839 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 KERAO60938 352 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 PDE9AO76083 593 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 TMEM63AO94886 807 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 PROS1P07225 676 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 PRKCHP24723 683 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 IGFALSP35858 605 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 IFNGR2P38484 337 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 SLC26A3P40879 764 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 ARF5P84085 180 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 SNCBQ16143 134 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 GRAMD1BQ3KR37 738 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 SYT13Q7L8C5 426 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 GPR180Q86V85 440 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 PLPP6Q8IY26 295 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 TBC1D21Q8IYX1 336 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 ACTRT2Q8TDY3 377 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 MCMBPQ9BTE3 642 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 DERL2Q9GZP9 239 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 NOL6Q9H6R4 1146 aaKnown RBP5.02□□□□□ -1.61
PHF3-210ENST00000509876 SUFUQ9UMX1 484 aa5.02□□□□□ -1.61
PHF3-210ENST00000509876 WASH3PC4AMC7 463 aa5.01□□□□□ -1.61
PHF3-210ENST00000509876 SHBGP04278 402 aa5.01□□□□□ -1.61
PHF3-210ENST00000509876 HIST1H2ABP04908 130 aa5.01□□□□□ -1.61
PHF3-210ENST00000509876 ANXA4P09525 319 aaPredicted RBP5.01□□□□□ -1.61
PHF3-210ENST00000509876 LSP1P33241 339 aa5.01□□□□□ -1.61
PHF3-210ENST00000509876 TPMTP51580 245 aa5.01□□□□□ -1.61
PHF3-210ENST00000509876 CCR5P51681 352 aa5.01□□□□□ -1.61
PHF3-210ENST00000509876 CLDN2P57739 230 aa5.01□□□□□ -1.61
PHF3-210ENST00000509876 ZNF549Q6P9A3 640 aa5.01□□□□□ -1.61
PHF3-210ENST00000509876 PAQR3Q6TCH7 311 aa5.01□□□□□ -1.61
PHF3-210ENST00000509876 BNC2Q6ZN30 1099 aaPredicted RBP5.01□□□□□ -1.61
PHF3-210ENST00000509876 HIST3H2AQ7L7L0 130 aa5.01□□□□□ -1.61
PHF3-210ENST00000509876 SLC29A4Q7RTT9 530 aa5.01□□□□□ -1.61
PHF3-210ENST00000509876 SCAIQ8N9R8 606 aa5.01□□□□□ -1.61
PHF3-210ENST00000509876 DTWD2Q8NBA8 298 aa5.01□□□□□ -1.61
PHF3-210ENST00000509876 HIST1H2ACQ93077 130 aa5.01□□□□□ -1.61
PHF3-210ENST00000509876 CCT8L2Q96SF2 557 aa5.01□□□□□ -1.61
PHF3-210ENST00000509876 CNPPD1Q9BV87 410 aa5.01□□□□□ -1.61
PHF3-210ENST00000509876 NOP53Q9NZM5 478 aaKnown RBP5.01□□□□□ -1.61
PHF3-210ENST00000509876 LHX3Q9UBR4 397 aa5.01□□□□□ -1.61
PHF3-210ENST00000509876 TRAF6Q9Y4K3 522 aa5.01□□□□□ -1.61
PHF3-210ENST00000509876 CLCA3PQ9Y6N3 262 aa5.01□□□□□ -1.61
PHF3-210ENST00000509876 CFAP73A6NFT4 308 aa5.01□□□□□ -1.61
PHF3-210ENST00000509876 NPIPB15A6NHN6 443 aaPredicted RBP5.01□□□□□ -1.61
PHF3-210ENST00000509876 B2RBV5 119 aa5.01□□□□□ -1.61
PHF3-210ENST00000509876 HNRNPCL2B2RXH8 293 aa5.01□□□□□ -1.61
PHF3-210ENST00000509876 M0R3G1 203 aa5.01□□□□□ -1.61
PHF3-210ENST00000509876 NR2F1P10589 423 aa5.01□□□□□ -1.61
PHF3-210ENST00000509876 HNRNPLP14866 589 aaKnown RBP eCLIP5.01□□□□□ -1.61
PHF3-210ENST00000509876 ATP5A1P25705 553 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms