RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 AASSQ9UDR5 926 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.61□□□□□ -0.39
SMG7-214ENST00000508461 PDE10AQ9Y233 779 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 OAS3Q9Y6K5 1087 aaKnown RBP12.61□□□□□ -0.39
SMG7-214ENST00000508461 XPNPEP2O43895 674 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 EEDO75530 441 aaKnown RBP12.61□□□□□ -0.39
SMG7-214ENST00000508461 GBAP04062 536 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 TTKP33981 857 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 CHI3L1P36222 383 aaPredicted RBP12.61□□□□□ -0.39
SMG7-214ENST00000508461 YBX1P67809 324 aaKnown RBP12.61□□□□□ -0.39
SMG7-214ENST00000508461 DAB2P98082 770 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 ARHGEF6Q15052 776 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 UGT3A2Q3SY77 523 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 R3HCC1LQ7Z5L2 792 aaKnown RBP12.61□□□□□ -0.39
SMG7-214ENST00000508461 ZFAND4Q86XD8 727 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 OR7A2PQ8NGA2 310 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 GANCQ8TET4 914 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 PEX13Q92968 403 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 NAA50Q9GZZ1 169 aaKnown RBP12.61□□□□□ -0.39
SMG7-214ENST00000508461 AGPAT4Q9NRZ5 378 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 TMEM39AQ9NV64 488 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 PDP1Q9P0J1 537 aaPredicted RBP12.61□□□□□ -0.39
SMG7-214ENST00000508461 PRSS21Q9Y6M0 314 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 LOC100506127A0A0U1RQW1 187 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 LINC00854A0A1B0GVQ3 168 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 SAP18O00422 153 aaKnown RBP12.61□□□□□ -0.39
SMG7-214ENST00000508461 BCKDKO14874 412 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 CCL16O15467 120 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 ZSCAN9O15535 394 aaPredicted RBP12.61□□□□□ -0.39
SMG7-214ENST00000508461 MATN4O95460 622 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 SEC24AO95486 1093 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 ANGPTL1O95841 491 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 SPDYE7PQ495Y7 208 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 PDCD4Q53EL6 469 aaKnown RBP12.61□□□□□ -0.39
SMG7-214ENST00000508461 RNF175Q8N4F7 328 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 GPR150Q8NGU9 434 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 EMILIN2Q9BXX0 1053 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 ARMC1Q9NVT9 282 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 IL17CQ9P0M4 197 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 KIAA1522Q9P206 1035 aaPredicted RBP12.61□□□□□ -0.39
SMG7-214ENST00000508461 SRRDQ9UH36 339 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 RAPGEFL1Q9UHV5 662 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 CEPT1Q9Y6K0 416 aa12.61□□□□□ -0.39
SMG7-214ENST00000508461 FPGTO14772 594 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 TULP3O75386 442 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 RASAL1O95294 804 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 MAGP20916 626 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 IL12AP29459 219 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 TXNL4AP83876 142 aaKnown RBP12.6□□□□□ -0.39
SMG7-214ENST00000508461 FOXM1Q08050 763 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 FGD3Q5JSP0 725 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 Q6ZSR9 355 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 PACRGLQ8N7B6 248 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 LINC01599Q8WXQ3 324 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 MUC13Q9H3R2 512 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 SPG21Q9NZD8 308 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 LZTS3O60299 673 aaPredicted RBP12.6□□□□□ -0.39
SMG7-214ENST00000508461 PGLSO95336 258 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 HNF4AP41235 474 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 NSG1P42857 185 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 DGKEP52429 567 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 KCNAB2Q13303 367 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 KRT33BQ14525 404 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 SF1Q15637 639 aaKnown RBP12.6□□□□□ -0.39
SMG7-214ENST00000508461 AFMIDQ63HM1 303 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 BBS7Q8IWZ6 715 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 LKAAEAR1Q8TD35 194 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 MAGED4Q96JG8 741 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 BIRC8Q96P09 236 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 ZNF556Q9HAH1 456 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 CD320Q9NPF0 282 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 PAPPA2Q9BXP8 1791 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 ZNF638Q14966 1978 aaKnown RBP12.6□□□□□ -0.39
SMG7-214ENST00000508461 C5orf58C9J3I9 102 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 MANBAO00462 879 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 E2F3O00716 465 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 INPPL1O15357 1258 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 KDM1AO60341 852 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 OPN1SWP03999 348 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 SLC10A3P09131 477 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 HMGCLP35914 325 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 SERPINB10P48595 397 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 CBLBQ13191 982 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 TYSND1Q2T9J0 566 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 INTS11Q5TA45 600 aaKnown RBP12.6□□□□□ -0.39
SMG7-214ENST00000508461 CES5AQ6NT32 575 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.6□□□□□ -0.392e-7■□□□□ 10.1
SMG7-214ENST00000508461 CYP2U1Q7Z449 544 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 TMPRSS11BQ86T26 416 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 CARM1Q86X55 608 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 NELL1Q92832 810 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 CEP19Q96LK0 163 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 C6orf62Q9GZU0 229 aaPredicted RBP12.6□□□□□ -0.39
SMG7-214ENST00000508461 IL26Q9NPH9 171 aa12.6□□□□□ -0.39
SMG7-214ENST00000508461 IGLV3-10A0A075B6K4 115 aa12.59□□□□□ -0.39
SMG7-214ENST00000508461 TRAV19A0A0A6YYK7 116 aa12.59□□□□□ -0.39
SMG7-214ENST00000508461 FXYD1O00168 92 aa12.59□□□□□ -0.39
SMG7-214ENST00000508461 TRBC1P01850 177 aa12.59□□□□□ -0.39
SMG7-214ENST00000508461 CHRM1P11229 460 aaPredicted RBP12.59□□□□□ -0.39
SMG7-214ENST00000508461 ATP6AP1Q15904 470 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms