RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 TRIM11Q96F44 468 aa13.38□□□□□ -0.27
DDR1-260ENST00000507533 BTBD6Q96KE9 485 aa13.38□□□□□ -0.27
DDR1-260ENST00000507533 NDC1Q9BTX1 674 aa13.38□□□□□ -0.27
DDR1-260ENST00000507533 CEP41Q9BYV8 373 aa13.38□□□□□ -0.27
DDR1-260ENST00000507533 SLC22A11Q9NSA0 550 aa13.38□□□□□ -0.27
DDR1-260ENST00000507533 IRAK4Q9NWZ3 460 aa13.38□□□□□ -0.27
DDR1-260ENST00000507533 ACTR10Q9NZ32 417 aa13.38□□□□□ -0.27
DDR1-260ENST00000507533 SEC14L3Q9UDX4 400 aa13.38□□□□□ -0.27
DDR1-260ENST00000507533 HS3ST3B1Q9Y662 390 aa13.38□□□□□ -0.27
DDR1-260ENST00000507533 ANKHD1Q8IWZ3 2542 aaKnown RBP13.37□□□□□ -0.27
DDR1-260ENST00000507533 GLYATL1P3A0A0U1RQE8 302 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 KLHL33A6NCF5 533 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 CLDN14O95500 239 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 MYBL1P10243 752 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 PYGMP11217 842 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 ESRRAP11474 423 aaPredicted RBP13.37□□□□□ -0.27
DDR1-260ENST00000507533 ALAS2P22557 587 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 MST1P26927 711 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 GABRA4P48169 554 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 ART1P52961 327 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 CASP6P55212 293 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 SRSF11Q05519 484 aaKnown RBP13.37□□□□□ -0.27
DDR1-260ENST00000507533 RBPJQ06330 500 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 CDSNQ15517 529 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 ZIC1Q15915 447 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 ZDHHC20Q5W0Z9 365 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 TLDC1Q6P9B6 456 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 SPESP1Q6UW49 350 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 TRIM73Q86UV7 250 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 AMIGO1Q86WK6 493 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 LILRA3Q8N6C8 439 aaPredicted RBP13.37□□□□□ -0.27
DDR1-260ENST00000507533 SPATA22Q8NHS9 363 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.37□□□□□ -0.27
DDR1-260ENST00000507533 TADA1Q96BN2 335 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 RBM41Q96IZ5 413 aaKnown RBP13.37□□□□□ -0.27
DDR1-260ENST00000507533 SPOCK3Q9BQ16 436 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 CCM2Q9BSQ5 444 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 TMUB1Q9BVT8 246 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 ISCUQ9H1K1 167 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 SLC25A51Q9H1U9 297 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 TFB2MQ9H5Q4 396 aaKnown RBP13.37□□□□□ -0.27
DDR1-260ENST00000507533 XKR8Q9H6D3 395 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 PLA2G3Q9NZ20 509 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.37□□□□□ -0.27
DDR1-260ENST00000507533 SPG11Q96JI7 2443 aa13.37□□□□□ -0.27
DDR1-260ENST00000507533 A0A087X0T9 212 aa13.36□□□□□ -0.27
DDR1-260ENST00000507533 TRAV17A0A0B4J275 112 aa13.36□□□□□ -0.27
DDR1-260ENST00000507533 DYTNA2CJ06 578 aa13.36□□□□□ -0.27
DDR1-260ENST00000507533 FAM228BP0C875 321 aa13.36□□□□□ -0.27
DDR1-260ENST00000507533 CDC25BP30305 580 aa13.36□□□□□ -0.27
DDR1-260ENST00000507533 GJC1P36383 396 aa13.36□□□□□ -0.27
DDR1-260ENST00000507533 TNFSF10P50591 281 aa13.36□□□□□ -0.27
DDR1-260ENST00000507533 TMPRSS15P98073 1019 aa13.36□□□□□ -0.27
DDR1-260ENST00000507533 PPIDQ08752 370 aaKnown RBP13.36□□□□□ -0.27
DDR1-260ENST00000507533 ITGA9Q13797 1035 aa13.36□□□□□ -0.27
DDR1-260ENST00000507533 RBBP7Q16576 425 aa13.36□□□□□ -0.27
DDR1-260ENST00000507533 ATP13A4Q4VNC1 1196 aa13.36□□□□□ -0.27
DDR1-260ENST00000507533 OVCH1Q7RTY7 1134 aa13.36□□□□□ -0.27
DDR1-260ENST00000507533 DAAM2Q86T65 1068 aa13.36□□□□□ -0.27
DDR1-260ENST00000507533 ADGRF3Q8IZF5 1079 aa13.36□□□□□ -0.27
DDR1-260ENST00000507533 PQLC3Q8N755 202 aa13.36□□□□□ -0.27
DDR1-260ENST00000507533 NIPA2Q8N8Q9 360 aa13.36□□□□□ -0.27
DDR1-260ENST00000507533 TC2NQ8N9U0 490 aa13.36□□□□□ -0.27
DDR1-260ENST00000507533 KCTD6Q8NC69 237 aa13.36□□□□□ -0.27
DDR1-260ENST00000507533 OR52E1Q8NGJ3 308 aa13.36□□□□□ -0.27
DDR1-260ENST00000507533 FKBP10Q96AY3 582 aa13.36□□□□□ -0.27
DDR1-260ENST00000507533 VPS50Q96JG6 964 aa13.36□□□□□ -0.27
DDR1-260ENST00000507533 ZNF830Q96NB3 372 aaPredicted RBP13.36□□□□□ -0.27
DDR1-260ENST00000507533 ZNF670Q9BS34 389 aa13.36□□□□□ -0.27
DDR1-260ENST00000507533 TRABDQ9H4I3 376 aa13.36□□□□□ -0.27
DDR1-260ENST00000507533 MRM3Q9HC36 420 aaKnown RBP13.36□□□□□ -0.27
DDR1-260ENST00000507533 IL17CQ9P0M4 197 aa13.36□□□□□ -0.27
DDR1-260ENST00000507533 ABI3Q9P2A4 366 aa13.36□□□□□ -0.27
DDR1-260ENST00000507533 PMPCBO75439 489 aa13.35□□□□□ -0.27
DDR1-260ENST00000507533 CRYABP02511 175 aaKnown RBP13.35□□□□□ -0.27
DDR1-260ENST00000507533 NOMO1Q15155 1222 aa13.35□□□□□ -0.27
DDR1-260ENST00000507533 C3AR1Q16581 482 aa13.35□□□□□ -0.27
DDR1-260ENST00000507533 NKG7Q16617 165 aa13.35□□□□□ -0.27
DDR1-260ENST00000507533 HADHQ16836 314 aaKnown RBP13.35□□□□□ -0.27
DDR1-260ENST00000507533 ASTE1Q2TB18 679 aaPredicted RBP13.35□□□□□ -0.27
DDR1-260ENST00000507533 FAAH2Q6GMR7 532 aa13.35□□□□□ -0.27
DDR1-260ENST00000507533 ALKBH5Q6P6C2 394 aaKnown RBP13.35□□□□□ -0.27
DDR1-260ENST00000507533 SHISA6Q6ZSJ9 500 aa13.35□□□□□ -0.27
DDR1-260ENST00000507533 PHC3Q8NDX5 983 aa13.35□□□□□ -0.27
DDR1-260ENST00000507533 OR11G2Q8NGC1 345 aa13.35□□□□□ -0.27
DDR1-260ENST00000507533 DNAJB8Q8NHS0 232 aa13.35□□□□□ -0.27
DDR1-260ENST00000507533 LINC00615Q96LM1 132 aaPredicted RBP13.35□□□□□ -0.27
DDR1-260ENST00000507533 SPSB2Q99619 263 aa13.35□□□□□ -0.27
DDR1-260ENST00000507533 CHP1Q99653 195 aa13.35□□□□□ -0.27
DDR1-260ENST00000507533 CHRNA10Q9GZZ6 450 aa13.35□□□□□ -0.27
DDR1-260ENST00000507533 SOX17Q9H6I2 414 aaPredicted RBP13.35□□□□□ -0.27
DDR1-260ENST00000507533 WDR54Q9H977 334 aa13.35□□□□□ -0.27
DDR1-260ENST00000507533 IP6K2Q9UHH9 426 aa13.35□□□□□ -0.27
DDR1-260ENST00000507533 NENFQ9UMX5 172 aa13.35□□□□□ -0.27
DDR1-260ENST00000507533 CCDC88CQ9P219 2028 aa13.35□□□□□ -0.27
DDR1-260ENST00000507533 CNTRLQ7Z7A1 2325 aa13.34□□□□□ -0.27
DDR1-260ENST00000507533 PCM1Q15154 2024 aa13.34□□□□□ -0.27
DDR1-260ENST00000507533 GAPDHSO14556 408 aaPredicted RBP13.34□□□□□ -0.27
DDR1-260ENST00000507533 BUD23O43709 281 aaKnown RBP13.34□□□□□ -0.27
DDR1-260ENST00000507533 AKR1B10O60218 316 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms