RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 OGFOD3Q6PK18 319 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 GPSM1Q86YR5 675 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 DCUN1D3Q8IWE4 304 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 TBC1D21Q8IYX1 336 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 ANKRD42Q8N9B4 389 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 KYQ8NBH2 561 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 FBXO15Q8NCQ5 510 aaPredicted RBP13.81□□□□□ -0.2
RNF4-208ENST00000507247 ARMC2Q8NEN0 867 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 OR5K2Q8NHB8 316 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 DENND1AQ8TEH3 1009 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 FERD3LQ96RJ6 166 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 NRTNQ99748 197 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 HGH1Q9BTY7 390 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 TRIT1Q9H3H1 467 aaKnown RBP13.81□□□□□ -0.2
RNF4-208ENST00000507247 PARVBQ9HBI1 364 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 NLGN3Q9NZ94 848 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 OARD1Q9Y530 152 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 CCDC189A1A4V9 331 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 NEMP2A6NFY4 417 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 NCF1BA6NI72 391 aaPredicted RBP13.8□□□□□ -0.2
RNF4-208ENST00000507247 OR5K4A6NMS3 321 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 NCF1CA8MVU1 366 aaPredicted RBP13.8□□□□□ -0.2
RNF4-208ENST00000507247 SUPT3HB4E1H0 165 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 G3V2L1 256 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 TRIM38O00635 465 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 CDX4O14627 284 aaPredicted RBP13.8□□□□□ -0.2
RNF4-208ENST00000507247 TM9SF1O15321 606 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 PCDHGA12O60330 932 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 SUPT3HO75486 399 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 ZWINTO95229 277 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 GUCA1CO95843 209 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 ENO2P09104 434 aaPredicted RBP13.8□□□□□ -0.2
RNF4-208ENST00000507247 ZNF883P0CG24 379 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 NCF1P14598 390 aaPredicted RBP13.8□□□□□ -0.2
RNF4-208ENST00000507247 SLC2A4P14672 509 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 XRCC1P18887 633 aaPredicted RBP13.8□□□□□ -0.2
RNF4-208ENST00000507247 NR1D1P20393 614 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 RPIAP49247 311 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 ATXN3P54252 364 aaPredicted RBP13.8□□□□□ -0.2
RNF4-208ENST00000507247 PPP2R2AP63151 447 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 CSRP2Q16527 193 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 FRA10AC1Q70Z53 315 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 C17orf82Q86X59 251 aaPredicted RBP13.8□□□□□ -0.2
RNF4-208ENST00000507247 GPR156Q8NFN8 814 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 OR4C6Q8NH72 309 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 MDM1Q8TC05 714 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 MAPK15Q8TD08 544 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 MCOLN3Q8TDD5 553 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 CXorf40BQ96DE9 158 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 CAMK1GQ96NX5 476 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 PKP4Q99569 1192 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 MVB12BQ9H7P6 319 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 RDH14Q9HBH5 336 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 MLXIPLQ9NP71 852 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 DNAAF2Q9NVR5 837 aaKnown RBP13.8□□□□□ -0.2
RNF4-208ENST00000507247 CPNE7Q9UBL6 633 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 PLAGL1Q9UM63 463 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 HEBP2Q9Y5Z4 205 aa13.8□□□□□ -0.2
RNF4-208ENST00000507247 CFAP54Q96N23 3096 aa13.79□□□□□ -0.2
RNF4-208ENST00000507247 MYO1CO00159 1063 aa13.79□□□□□ -0.2
RNF4-208ENST00000507247 DLX3O60479 287 aa13.79□□□□□ -0.2
RNF4-208ENST00000507247 LRP3O75074 770 aa13.79□□□□□ -0.2
RNF4-208ENST00000507247 RPN2P04844 631 aa13.79□□□□□ -0.2
RNF4-208ENST00000507247 DHRS4L1P0CG22 281 aa13.79□□□□□ -0.2
RNF4-208ENST00000507247 MAP4P27816 1152 aaKnown RBP13.79□□□□□ -0.2
RNF4-208ENST00000507247 SLC18A1P54219 525 aa13.79□□□□□ -0.2
RNF4-208ENST00000507247 WDR4P57081 412 aaKnown RBP13.79□□□□□ -0.2
RNF4-208ENST00000507247 CDKL1Q00532 357 aa13.79□□□□□ -0.2
RNF4-208ENST00000507247 PCLAFQ15004 111 aa13.79□□□□□ -0.2
RNF4-208ENST00000507247 ZXDCQ2QGD7 858 aaPredicted RBP13.79□□□□□ -0.2
RNF4-208ENST00000507247 C18orf21Q32NC0 220 aaPredicted RBP13.79□□□□□ -0.2
RNF4-208ENST00000507247 TRIM48Q8IWZ4 208 aa13.79□□□□□ -0.2
RNF4-208ENST00000507247 SLC35F3Q8IY50 421 aa13.79□□□□□ -0.2
RNF4-208ENST00000507247 ARL14Q8N4G2 192 aa13.79□□□□□ -0.2
RNF4-208ENST00000507247 LMNTD1Q8N9Z9 388 aa13.79□□□□□ -0.2
RNF4-208ENST00000507247 CCDC63Q8NA47 563 aa13.79□□□□□ -0.2
RNF4-208ENST00000507247 OR9A1PQ8NGU1 263 aa13.79□□□□□ -0.2
RNF4-208ENST00000507247 MGARPQ8TDB4 240 aa13.79□□□□□ -0.2
RNF4-208ENST00000507247 JPH3Q8WXH2 748 aaPredicted RBP13.79□□□□□ -0.2
RNF4-208ENST00000507247 MENTQ9BUN1 341 aa13.79□□□□□ -0.2
RNF4-208ENST00000507247 MECRQ9BV79 373 aa13.79□□□□□ -0.2
RNF4-208ENST00000507247 EDEM2Q9BV94 578 aa13.79□□□□□ -0.2
RNF4-208ENST00000507247 SLC40A1Q9NP59 571 aa13.79□□□□□ -0.2
RNF4-208ENST00000507247 POT1Q9NUX5 634 aa13.79□□□□□ -0.2
RNF4-208ENST00000507247 FAM53CQ9NYF3 392 aa13.79□□□□□ -0.2
RNF4-208ENST00000507247 NUDT4Q9NZJ9 180 aa13.79□□□□□ -0.2
RNF4-208ENST00000507247 CD274Q9NZQ7 290 aa13.79□□□□□ -0.2
RNF4-208ENST00000507247 TDRKHQ9Y2W6 561 aaKnown RBP13.79□□□□□ -0.2
RNF4-208ENST00000507247 LY6G6EA0A0G2JKS1 128 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 SYCE1LA8MT33 242 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 A8MT66 165 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 PPM1DO15297 605 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 KLK8O60259 260 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 VIPP01282 170 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 MYF5P13349 255 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 IMPA1P29218 277 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 OAS2P29728 719 aaKnown RBP13.78□□□□□ -0.2
RNF4-208ENST00000507247 FASLGP48023 281 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 AP1S2P56377 157 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 HHEXQ03014 270 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms