RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 CTF1Q16619 201 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 SOWAHAQ2M3V2 549 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 TUBB8Q3ZCM7 444 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 Q3ZCU0 254 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZNF876PQ49A33 203 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 XKR6Q5GH73 641 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 CBWD5Q5RIA9 395 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 PDSS1Q5T2R2 415 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 CCNJQ5T5M9 372 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 GKAP1Q5VSY0 366 aaPredicted RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 SNX30Q5VWJ9 437 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 IL23RQ5VWK5 629 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 PDPK2PQ6A1A2 396 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 ATL3Q6DD88 541 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 ITPRIPL1Q6GPH6 555 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 CTRB2Q6GPI1 263 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 PM20D1Q6GTS8 502 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 TRNP1Q6NT89 227 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 FAM180BQ6P0A1 224 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 TMEM53Q6P2H8 277 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 ALKBH5Q6P6C2 394 aaKnown RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 FAM171BQ6P995 826 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 SHQ1Q6PI26 577 aaKnown RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 C1orf228Q6PIY5 440 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 LRRC31Q6UY01 552 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 FAM47EQ6ZV65 393 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 TAOK1Q7L7X3 1001 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 TBC1D26Q86UD7 250 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 VPS36Q86VN1 386 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 STX12Q86Y82 276 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 KMT5CQ86Y97 462 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 WDR49Q8IV35 697 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 ODF3L1Q8IXM7 274 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 CACNA2D3Q8IZS8 1091 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 DSELQ8IZU8 1212 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 LIX1Q8N485 282 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 SPC24Q8NBT2 197 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 ADAD2Q8NCV1 583 aaKnown RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 SLC24A4Q8NFF2 622 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 GJC3Q8NFK1 279 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 OR6S1Q8NH40 331 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 CSGALNACT1Q8TDX6 532 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 UTP15Q8TED0 518 aaKnown RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 DYDC1Q8WWB3 177 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 CCT6BQ92526 530 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 CASP10Q92851 521 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 NCLNQ969V3 563 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 EFHD2Q96C19 240 aaPredicted RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 TUBGCP3Q96CW5 907 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZNF599Q96NL3 588 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 NR1H4Q96RI1 486 aaPredicted RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 BBS4Q96RK4 519 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 SIN3AQ96ST3 1273 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 LITAFQ99732 161 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 FSD1Q9BTV5 496 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 NUSAP1Q9BXS6 441 aaKnown RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 TEX13BQ9BXU2 312 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 PARD6BQ9BYG5 372 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 DCTPP1Q9H773 170 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 FKRPQ9H9S5 495 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 KIF9Q9HAQ2 790 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 KCNK13Q9HB14 408 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 SCPEP1Q9HB40 452 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 PCDH9Q9HC56 1237 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 CRLF2Q9HC73 371 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 TLR8Q9NR97 1041 aaKnown RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 SERINC1Q9NRX5 453 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 DDX18Q9NVP1 670 aaKnown RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 ARMC1Q9NVT9 282 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 ANO10Q9NW15 660 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 TMEM160Q9NX00 188 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 MCM9Q9NXL9 1143 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 GDAP2Q9NXN4 497 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 TAS2R7Q9NYW3 318 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 CISD1Q9NZ45 108 aaKnown RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 UBA2Q9UBT2 640 aaPredicted RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 MOSPD1Q9UJG1 213 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 RALYQ9UKM9 306 aaKnown RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 DDX19BQ9UMR2 479 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 C15orf41Q9Y2V0 281 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 AMDHD2Q9Y303 409 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 CBY1Q9Y3M2 126 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 FADS3Q9Y5Q0 445 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 TRPV2Q9Y5S1 764 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 BZW2Q9Y6E2 419 aaKnown RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 RNF215Q9Y6U7 377 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 WRNQ14191 1432 aaPredicted RBP eCLIP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 CEP162Q5TB80 1403 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 GAPVD1Q14C86 1478 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 WDR7Q9Y4E6 1490 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 C1orf232A0A0U1RR37 186 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 SLC9B1P1A6NJY1 282 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 B4DLN1 442 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 ZNF879B4DU55 563 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 GPR89AB7ZAQ6 455 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 HSBP1L1C9JCN9 74 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 KLRF2D3W0D1 207 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 DDX39AO00148 427 aaKnown RBP1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms