RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 SLC5A7Q9GZV3 580 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 LMAN1LQ9HAT1 526 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 CDH20Q9HBT6 801 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 SMARCAL1Q9NZC9 954 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 CNIH4Q9P003 139 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 SIX4Q9UIU6 781 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 MTUS1Q9ULD2 1270 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 SPIN1Q9Y657 262 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 ADAMTS12P58397 1594 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 CEP170Q5SW79 1584 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 ERCC6L2Q5T890 1561 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 WRNQ14191 1432 aaPredicted RBP eCLIP5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 ARID1BQ8NFD5 2236 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 SHROOM2Q13796 1616 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 A0A1W2PRV1 198 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 MED19A0JLT2 244 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 FAM90A10PA6NDY2 464 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 EIF3DO15371 548 aaKnown RBP eCLIP5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 ST8SIA3O43173 380 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 SELENOFO60613 162 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 RTN2O75298 545 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 PNPP00491 289 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 LINC00271P0C7V0 271 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 FAM106CPP0CH98 169 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 SPP1P10451 314 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 CASP3P42574 277 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 PCYT1AP49585 367 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 GMPSP49915 693 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 PEX5P50542 639 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 BRWD1-AS2P59051 145 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 ISL1P61371 349 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 DLK1P80370 383 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 PRKAA1Q13131 559 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 ETFDHQ16134 617 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 KBTBD12Q3ZCT8 623 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 SETMARQ53H47 684 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 SYT14P1Q58G82 188 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 MDH1BQ5I0G3 518 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 TXNRD3NBQ6F5E7 133 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 NOTUMQ6P988 496 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 TMEM270Q6UE05 265 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 TECPR1Q7Z6L1 1165 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 ADHFE1Q8IWW8 467 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 CLYBLQ8N0X4 340 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 ATP6V0A1Q93050 837 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 PDLIM5Q96HC4 596 aaKnown RBP5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 HNRNPABQ99729 332 aaKnown RBP5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 ZNF350Q9GZX5 532 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 ELOVL5Q9NYP7 299 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 ZNF224Q9NZL3 707 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 MYO6Q9UM54 1294 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 GRIN2AQ12879 1464 aa5.05□□□□□ -1.6
HMGB1P3-201ENST00000502802 ZCWPW2A0A1B0GU75 182 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 GTPBP10A4D1E9 387 aaKnown RBP5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 H3BNX3 289 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 ZNHIT1O43257 154 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 AKAP8O43823 692 aaKnown RBP5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 FCGR3BO75015 233 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 LUC7L3O95232 432 aaKnown RBP5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 H1F0P07305 194 aaKnown RBP5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 KRT19P08727 400 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 SMIM18P0DKX4 95 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 GM2AP17900 193 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 ITIH1P19827 911 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 TNFRSF8P28908 595 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 GNL1P36915 607 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 HSD17B3P37058 310 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 RGS7P49802 495 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 PGGT1BP53609 377 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 RPA4Q13156 261 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 MYBPHQ13203 477 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 PKN2Q16513 984 aaKnown RBP5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 SLC39A12Q504Y0 691 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 TATDN1Q6P1N9 297 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 CASC4Q6P4E1 433 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 RHBDF2Q6PJF5 856 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 LINGO4Q6UY18 593 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 RAD9BQ6WBX8 426 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 ZNF517Q6ZMY9 492 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 NUP54Q7Z3B4 507 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 PTOV1Q86YD1 416 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 ARHGAP24Q8N264 748 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 CLIP4Q8N3C7 705 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 ZNF114Q8NC26 417 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 RDM1Q8NG50 284 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 B4GALNT2Q8NHY0 566 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 NTN5Q8WTR8 489 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 DHX58Q96C10 678 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 CDCA5Q96FF9 252 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 TMEM19Q96HH6 336 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 AK8Q96MA6 479 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 NEURL2Q9BR09 285 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 DNAJC4Q9NNZ3 241 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 ACKR4Q9NPB9 350 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 KLHL1Q9NR64 748 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 DNAJC17Q9NVM6 304 aaKnown RBP5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 C11orf21Q9P2W6 132 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 MOSPD1Q9UJG1 213 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 OR2W1Q9Y3N9 320 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms