RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 AMIGO1Q86WK6 493 aa24.38■■□□□ 1.49
LSM6-202ENST00000502781 OOSP2Q86WS3 158 aa24.38■■□□□ 1.49
LSM6-202ENST00000502781 ASB11Q8WXH4 323 aa24.38■■□□□ 1.49
LSM6-202ENST00000502781 ELMO2Q96JJ3 720 aa24.38■■□□□ 1.49
LSM6-202ENST00000502781 FOPNLQ96NB1 174 aa24.38■■□□□ 1.49
LSM6-202ENST00000502781 CYTH2Q99418 400 aa24.38■■□□□ 1.49
LSM6-202ENST00000502781 GPR22Q99680 433 aa24.38■■□□□ 1.49
LSM6-202ENST00000502781 TXNDC16Q9P2K2 825 aa24.38■■□□□ 1.49
LSM6-202ENST00000502781 TDRKHQ9Y2W6 561 aaKnown RBP24.38■■□□□ 1.49
LSM6-202ENST00000502781 MTO1Q9Y2Z2 717 aaKnown RBP24.38■■□□□ 1.49
LSM6-202ENST00000502781 TRABD2BA6NFA1 517 aa24.37■■□□□ 1.49
LSM6-202ENST00000502781 GFYI3L273 518 aa24.37■■□□□ 1.49
LSM6-202ENST00000502781 BTN3A3O00478 584 aa24.37■■□□□ 1.49
LSM6-202ENST00000502781 ACSL3O95573 720 aa24.37■■□□□ 1.49
LSM6-202ENST00000502781 SHMT2P34897 504 aa24.37■■□□□ 1.49
LSM6-202ENST00000502781 CCNFP41002 786 aa24.37■■□□□ 1.49
LSM6-202ENST00000502781 PPM1FP49593 454 aaPredicted RBP24.37■■□□□ 1.49
LSM6-202ENST00000502781 TAS2R39P59534 338 aa24.37■■□□□ 1.49
LSM6-202ENST00000502781 GRTP1Q5TC63 336 aa24.37■■□□□ 1.49
LSM6-202ENST00000502781 ADGRF3Q8IZF5 1079 aa24.37■■□□□ 1.49
LSM6-202ENST00000502781 WDR36Q8NI36 951 aaKnown RBP24.37■■□□□ 1.49
LSM6-202ENST00000502781 EEF1AKMT1Q8WVE0 214 aa24.37■■□□□ 1.49
LSM6-202ENST00000502781 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.37■■□□□ 1.49
LSM6-202ENST00000502781 RAD51AP1Q96B01 352 aa24.37■■□□□ 1.49
LSM6-202ENST00000502781 ZDHHC12Q96GR4 267 aa24.37■■□□□ 1.49
LSM6-202ENST00000502781 ZMYND15Q9H091 742 aa24.37■■□□□ 1.49
LSM6-202ENST00000502781 XKR8Q9H6D3 395 aa24.37■■□□□ 1.49
LSM6-202ENST00000502781 OR6C2Q9NZP2 312 aa24.37■■□□□ 1.49
LSM6-202ENST00000502781 BTN3A1O00481 513 aa24.36■■□□□ 1.49
LSM6-202ENST00000502781 KDM1AO60341 852 aa24.36■■□□□ 1.49
LSM6-202ENST00000502781 LSSP48449 732 aa24.36■■□□□ 1.49
LSM6-202ENST00000502781 PGGT1BP53609 377 aa24.36■■□□□ 1.49
LSM6-202ENST00000502781 PPP1CAP62136 330 aa24.36■■□□□ 1.49
LSM6-202ENST00000502781 POU4F1Q01851 419 aa24.36■■□□□ 1.49
LSM6-202ENST00000502781 PDAP1Q13442 181 aaKnown RBP24.36■■□□□ 1.49
LSM6-202ENST00000502781 TRMT10CQ7L0Y3 403 aaKnown RBP24.36■■□□□ 1.49
LSM6-202ENST00000502781 PIWIL4Q7Z3Z4 852 aaKnown RBP24.36■■□□□ 1.49
LSM6-202ENST00000502781 PRSS42Q7Z5A4 293 aa24.36■■□□□ 1.49
LSM6-202ENST00000502781 FBXO15Q8NCQ5 510 aaPredicted RBP24.36■■□□□ 1.49
LSM6-202ENST00000502781 RCBTB1Q8NDN9 531 aa24.36■■□□□ 1.49
LSM6-202ENST00000502781 PRR11Q96HE9 360 aaPredicted RBP24.36■■□□□ 1.49
LSM6-202ENST00000502781 TGM7Q96PF1 710 aa24.36■■□□□ 1.49
LSM6-202ENST00000502781 KIF26BQ2KJY2 2108 aa24.35■■□□□ 1.49
LSM6-202ENST00000502781 ARHGEF33A8MVX0 844 aa24.35■■□□□ 1.49
LSM6-202ENST00000502781 MATN2O00339 956 aa24.35■■□□□ 1.49
LSM6-202ENST00000502781 FAM155BO75949 473 aa24.35■■□□□ 1.49
LSM6-202ENST00000502781 WISP3O95389 354 aaPredicted RBP24.35■■□□□ 1.49
LSM6-202ENST00000502781 PKLRP30613 574 aa24.35■■□□□ 1.49
LSM6-202ENST00000502781 SPRP35270 261 aaPredicted RBP24.35■■□□□ 1.49
LSM6-202ENST00000502781 BDKRB1P46663 353 aa24.35■■□□□ 1.49
LSM6-202ENST00000502781 RGS4P49798 205 aa24.35■■□□□ 1.49
LSM6-202ENST00000502781 RAB28P51157 221 aa24.35■■□□□ 1.49
LSM6-202ENST00000502781 CCSMST1Q4G0I0 132 aa24.35■■□□□ 1.49
LSM6-202ENST00000502781 EEF1AKMT2Q5JPI9 291 aaKnown RBP24.35■■□□□ 1.49
LSM6-202ENST00000502781 IRGCQ6NXR0 463 aa24.35■■□□□ 1.49
LSM6-202ENST00000502781 IGF2-ASQ6U949 168 aa24.35■■□□□ 1.49
LSM6-202ENST00000502781 TMEM207Q6UWW9 146 aa24.35■■□□□ 1.49
LSM6-202ENST00000502781 RAB11FIP2Q7L804 512 aa24.35■■□□□ 1.49
LSM6-202ENST00000502781 CEP97Q8IW35 865 aa24.35■■□□□ 1.49
LSM6-202ENST00000502781 GSPT2Q8IYD1 628 aaKnown RBP24.35■■□□□ 1.49
LSM6-202ENST00000502781 MAGEC3Q8TD91 643 aa24.35■■□□□ 1.49
LSM6-202ENST00000502781 PDLIM5Q96HC4 596 aaKnown RBP24.35■■□□□ 1.49
LSM6-202ENST00000502781 CD180Q99467 661 aa24.35■■□□□ 1.49
LSM6-202ENST00000502781 POLR1BQ9H9Y6 1135 aa24.35■■□□□ 1.49
LSM6-202ENST00000502781 POPDC3Q9HBV1 291 aa24.35■■□□□ 1.49
LSM6-202ENST00000502781 TSR3Q9UJK0 312 aaKnown RBP24.35■■□□□ 1.49
LSM6-202ENST00000502781 POMT2Q9UKY4 750 aa24.35■■□□□ 1.49
LSM6-202ENST00000502781 PLAGL1Q9UM63 463 aa24.35■■□□□ 1.49
LSM6-202ENST00000502781 PCDHGA8Q9Y5G5 932 aa24.35■■□□□ 1.49
LSM6-202ENST00000502781 KIF1CO43896 1103 aaKnown RBP24.34■■□□□ 1.49
LSM6-202ENST00000502781 ABHD2P08910 425 aa24.34■■□□□ 1.49
LSM6-202ENST00000502781 ZNF37AP17032 561 aaPredicted RBP24.34■■□□□ 1.49
LSM6-202ENST00000502781 POLR2CP19387 275 aaPredicted RBP24.34■■□□□ 1.49
LSM6-202ENST00000502781 PMS2P54278 862 aa24.34■■□□□ 1.49
LSM6-202ENST00000502781 TTC23LQ6PF05 361 aa24.34■■□□□ 1.49
LSM6-202ENST00000502781 CMKLR1Q99788 373 aa24.34■■□□□ 1.49
LSM6-202ENST00000502781 KLHL3Q9UH77 587 aa24.34■■□□□ 1.49
LSM6-202ENST00000502781 SATB2Q9UPW6 733 aa24.34■■□□□ 1.49
LSM6-202ENST00000502781 CHD8Q9HCK8 2581 aa24.34■■□□□ 1.49
LSM6-202ENST00000502781 AKAP13Q12802 2813 aa24.34■■□□□ 1.49
LSM6-202ENST00000502781 TPRP12270 2363 aaKnown RBP24.33■■□□□ 1.49
LSM6-202ENST00000502781 PMS2P1A4D2B8 440 aa24.33■■□□□ 1.49
LSM6-202ENST00000502781 MYO1CO00159 1063 aa24.33■■□□□ 1.49
LSM6-202ENST00000502781 PLD2O14939 933 aa24.33■■□□□ 1.49
LSM6-202ENST00000502781 DXOO77932 396 aaKnown RBP24.33■■□□□ 1.49
LSM6-202ENST00000502781 CATP04040 527 aaKnown RBP24.33■■□□□ 1.49
LSM6-202ENST00000502781 CAPNS1P04632 268 aa24.33■■□□□ 1.49
LSM6-202ENST00000502781 MPOP05164 745 aa24.33■■□□□ 1.49
LSM6-202ENST00000502781 IL2P60568 153 aa24.33■■□□□ 1.49
LSM6-202ENST00000502781 PRKAA1Q13131 559 aa24.33■■□□□ 1.49
LSM6-202ENST00000502781 C3orf38Q5JPI3 329 aa24.33■■□□□ 1.49
LSM6-202ENST00000502781 SNAP47Q5SQN1 464 aa24.33■■□□□ 1.49
LSM6-202ENST00000502781 CARFQ8N187 725 aa24.33■■□□□ 1.49
LSM6-202ENST00000502781 LINC01555Q8NAE3 123 aa24.33■■□□□ 1.49
LSM6-202ENST00000502781 AGBL5Q8NDL9 886 aa24.33■■□□□ 1.49
LSM6-202ENST00000502781 DENND1AQ8TEH3 1009 aa24.33■■□□□ 1.49
LSM6-202ENST00000502781 KLHL6Q8WZ60 621 aa24.33■■□□□ 1.49
LSM6-202ENST00000502781 NXPE2Q96DL1 559 aa24.33■■□□□ 1.49
LSM6-202ENST00000502781 LINGO1Q96FE5 620 aa24.33■■□□□ 1.49
LSM6-202ENST00000502781 ZNF768Q9H5H4 540 aaKnown RBP24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms