RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 PMS2P1A4D2B8 440 aa17.3■□□□□ 0.36
CCHCR1-216ENST00000502557 TRABD2BA6NFA1 517 aa17.3■□□□□ 0.36
CCHCR1-216ENST00000502557 ARHGEF33A8MVX0 844 aa17.3■□□□□ 0.36
CCHCR1-216ENST00000502557 BTN3A1O00481 513 aa17.3■□□□□ 0.36
CCHCR1-216ENST00000502557 PSIP1O75475 530 aaKnown RBP17.3■□□□□ 0.36
CCHCR1-216ENST00000502557 POLR2CP19387 275 aaPredicted RBP17.3■□□□□ 0.36
CCHCR1-216ENST00000502557 SAT1P21673 171 aa17.3■□□□□ 0.36
CCHCR1-216ENST00000502557 CCNFP41002 786 aa17.3■□□□□ 0.36
CCHCR1-216ENST00000502557 RGS4P49798 205 aa17.3■□□□□ 0.36
CCHCR1-216ENST00000502557 C16orf72Q14CZ0 275 aa17.3■□□□□ 0.36
CCHCR1-216ENST00000502557 GRTP1Q5TC63 336 aa17.3■□□□□ 0.36
CCHCR1-216ENST00000502557 IRGCQ6NXR0 463 aa17.3■□□□□ 0.36
CCHCR1-216ENST00000502557 TRMT10CQ7L0Y3 403 aaKnown RBP17.3■□□□□ 0.36
CCHCR1-216ENST00000502557 ARHGAP22Q7Z5H3 698 aa17.3■□□□□ 0.36
CCHCR1-216ENST00000502557 ADGRF3Q8IZF5 1079 aa17.3■□□□□ 0.36
CCHCR1-216ENST00000502557 RCBTB1Q8NDN9 531 aa17.3■□□□□ 0.36
CCHCR1-216ENST00000502557 GATA6Q92908 595 aa17.3■□□□□ 0.36
CCHCR1-216ENST00000502557 ZDHHC12Q96GR4 267 aa17.3■□□□□ 0.36
CCHCR1-216ENST00000502557 GPR22Q99680 433 aa17.3■□□□□ 0.36
CCHCR1-216ENST00000502557 MENTQ9BUN1 341 aa17.3■□□□□ 0.36
CCHCR1-216ENST00000502557 ARHGEF17Q96PE2 2063 aaPredicted RBP17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 KRT87PA6NCN2 255 aa17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 A8MU76 341 aa17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 AGRPO00253 132 aa17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 HGSO14964 777 aaPredicted RBP17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 KIF1CO43896 1103 aaKnown RBP17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 KDM1AO60341 852 aa17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 TSPAN12O95859 305 aa17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 PKLRP30613 574 aa17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 SHMT2P34897 504 aa17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 SPRP35270 261 aaPredicted RBP17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 PMS2P54278 862 aa17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 POU4F1Q01851 419 aa17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 ARMC6Q6NXE6 501 aa17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 TTC23LQ6PF05 361 aa17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 TMEM207Q6UWW9 146 aa17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 CEP97Q8IW35 865 aa17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 WDR36Q8NI36 951 aaKnown RBP17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 UHMK1Q8TAS1 419 aaKnown RBP17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 ASB11Q8WXH4 323 aa17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 RAD51AP1Q96B01 352 aa17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 MRRFQ96E11 262 aaKnown RBP17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 LINGO1Q96FE5 620 aa17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 IL17FQ96PD4 163 aa17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 TMEM121BQ9BXQ6 578 aaPredicted RBP17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 NRSN2Q9GZP1 204 aa17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 TWSG1Q9GZX9 223 aa17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 SLC39A10Q9ULF5 831 aa17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 SATB2Q9UPW6 733 aa17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 V9GYY5 206 aaPredicted RBP17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 COL27A1Q8IZC6 1860 aaPredicted RBP17.29■□□□□ 0.36
CCHCR1-216ENST00000502557 GFYI3L273 518 aa17.28■□□□□ 0.36
CCHCR1-216ENST00000502557 CATP04040 527 aaKnown RBP17.28■□□□□ 0.36
CCHCR1-216ENST00000502557 MPOP05164 745 aa17.28■□□□□ 0.36
CCHCR1-216ENST00000502557 ABHD2P08910 425 aa17.28■□□□□ 0.36
CCHCR1-216ENST00000502557 ANKRD34CP0C6C1 535 aa17.28■□□□□ 0.36
CCHCR1-216ENST00000502557 KPNA2P52292 529 aaKnown RBP17.28■□□□□ 0.36
CCHCR1-216ENST00000502557 IL2P60568 153 aa17.28■□□□□ 0.36
CCHCR1-216ENST00000502557 PRKAA1Q13131 559 aa17.28■□□□□ 0.36
CCHCR1-216ENST00000502557 EIF3IQ13347 325 aaKnown RBP17.28■□□□□ 0.36
CCHCR1-216ENST00000502557 ZNF460Q14592 562 aa17.28■□□□□ 0.36
CCHCR1-216ENST00000502557 RTP5Q14D33 572 aa17.28■□□□□ 0.36
CCHCR1-216ENST00000502557 C3orf38Q5JPI3 329 aa17.28■□□□□ 0.36
CCHCR1-216ENST00000502557 LRRC8EQ6NSJ5 796 aa17.28■□□□□ 0.36
CCHCR1-216ENST00000502557 FAM92BQ6ZTR7 304 aa17.28■□□□□ 0.36
CCHCR1-216ENST00000502557 RAB11FIP2Q7L804 512 aa17.28■□□□□ 0.36
CCHCR1-216ENST00000502557 PRSS42Q7Z5A4 293 aa17.28■□□□□ 0.36
CCHCR1-216ENST00000502557 LMNTD1Q8N9Z9 388 aa17.28■□□□□ 0.36
CCHCR1-216ENST00000502557 MAGEC3Q8TD91 643 aa17.28■□□□□ 0.36
CCHCR1-216ENST00000502557 PRR11Q96HE9 360 aaPredicted RBP17.28■□□□□ 0.36
CCHCR1-216ENST00000502557 CAB39LQ9H9S4 337 aa17.28■□□□□ 0.36
CCHCR1-216ENST00000502557 POLR1BQ9H9Y6 1135 aa17.28■□□□□ 0.36
CCHCR1-216ENST00000502557 OR6C2Q9NZP2 312 aa17.28■□□□□ 0.36
CCHCR1-216ENST00000502557 LOXL2Q9Y4K0 774 aa17.28■□□□□ 0.36
CCHCR1-216ENST00000502557 ASXL3Q9C0F0 2248 aa17.27■□□□□ 0.36
CCHCR1-216ENST00000502557 A0A087WUV0 522 aaPredicted RBP17.27■□□□□ 0.36
CCHCR1-216ENST00000502557 GSAPA4D1B5 854 aa17.27■□□□□ 0.36
CCHCR1-216ENST00000502557 RASGRF2O14827 1237 aa17.27■□□□□ 0.36
CCHCR1-216ENST00000502557 PLD2O14939 933 aa17.27■□□□□ 0.36
CCHCR1-216ENST00000502557 TOX3O15405 576 aaPredicted RBP17.27■□□□□ 0.36
CCHCR1-216ENST00000502557 RIPK2O43353 540 aa17.27■□□□□ 0.36
CCHCR1-216ENST00000502557 WISP3O95389 354 aaPredicted RBP17.27■□□□□ 0.36
CCHCR1-216ENST00000502557 ITGA2BP08514 1039 aa17.27■□□□□ 0.36
CCHCR1-216ENST00000502557 CHRM5P08912 532 aaPredicted RBP17.27■□□□□ 0.36
CCHCR1-216ENST00000502557 HGFP14210 728 aa17.27■□□□□ 0.36
CCHCR1-216ENST00000502557 ZNF37AP17032 561 aaPredicted RBP17.27■□□□□ 0.36
CCHCR1-216ENST00000502557 LSSP48449 732 aa17.27■□□□□ 0.36
CCHCR1-216ENST00000502557 RAB28P51157 221 aa17.27■□□□□ 0.36
CCHCR1-216ENST00000502557 SLC12A2P55011 1212 aa17.27■□□□□ 0.36
CCHCR1-216ENST00000502557 VSNL1P62760 191 aa17.27■□□□□ 0.36
CCHCR1-216ENST00000502557 GABREP78334 506 aa17.27■□□□□ 0.36
CCHCR1-216ENST00000502557 USP10Q14694 798 aaKnown RBP17.27■□□□□ 0.36
CCHCR1-216ENST00000502557 CACHD1Q5VU97 1274 aa17.27■□□□□ 0.36
CCHCR1-216ENST00000502557 UBE2R2Q712K3 238 aaPredicted RBP17.27■□□□□ 0.36
CCHCR1-216ENST00000502557 MYO1HQ8N1T3 1032 aa17.27■□□□□ 0.36
CCHCR1-216ENST00000502557 FBXO39Q8N4B4 442 aa17.27■□□□□ 0.36
CCHCR1-216ENST00000502557 LINC01555Q8NAE3 123 aa17.27■□□□□ 0.36
CCHCR1-216ENST00000502557 FBXO15Q8NCQ5 510 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms