RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 GNPTGQ9UJJ9 305 aa23.45■■□□□ 1.34
HLA-C-209ENST00000495835 SOX13Q9UN79 622 aa23.45■■□□□ 1.34
HLA-C-209ENST00000495835 POLHQ9Y253 713 aa23.45■■□□□ 1.34
HLA-C-209ENST00000495835 MRFAP1Q9Y605 127 aa23.45■■□□□ 1.34
HLA-C-209ENST00000495835 SPTA1P02549 2419 aa23.45■■□□□ 1.34
HLA-C-209ENST00000495835 MAGEB16A2A368 324 aa23.44■■□□□ 1.34
HLA-C-209ENST00000495835 NDUFS3O75489 264 aa23.44■■□□□ 1.34
HLA-C-209ENST00000495835 CHRM5P08912 532 aaPredicted RBP23.44■■□□□ 1.34
HLA-C-209ENST00000495835 HBQ1P09105 142 aa23.44■■□□□ 1.34
HLA-C-209ENST00000495835 NMBRP28336 390 aa23.44■■□□□ 1.34
HLA-C-209ENST00000495835 CRADDP78560 199 aa23.44■■□□□ 1.34
HLA-C-209ENST00000495835 KCNJ11Q14654 390 aa23.44■■□□□ 1.34
HLA-C-209ENST00000495835 KIR2DS3Q14952 304 aa23.44■■□□□ 1.34
HLA-C-209ENST00000495835 TMED2Q15363 201 aa23.44■■□□□ 1.34
HLA-C-209ENST00000495835 CYP1B1Q16678 543 aa23.44■■□□□ 1.34
HLA-C-209ENST00000495835 IZUMO3Q5VZ72 239 aa23.44■■□□□ 1.34
HLA-C-209ENST00000495835 MRNIPQ6NTE8 343 aa23.44■■□□□ 1.34
HLA-C-209ENST00000495835 OR2A14Q96R47 310 aa23.44■■□□□ 1.34
HLA-C-209ENST00000495835 DPH2Q9BQC3 489 aaPredicted RBP23.44■■□□□ 1.34
HLA-C-209ENST00000495835 MARCH4Q9P2E8 410 aaPredicted RBP23.44■■□□□ 1.34
HLA-C-209ENST00000495835 TDRKHQ9Y2W6 561 aaKnown RBP23.44■■□□□ 1.34
HLA-C-209ENST00000495835 KCNMB2Q9Y691 235 aa23.44■■□□□ 1.34
HLA-C-209ENST00000495835 ZSCAN12O43309 604 aa23.43■■□□□ 1.34
HLA-C-209ENST00000495835 SLC28A2O43868 658 aa23.43■■□□□ 1.34
HLA-C-209ENST00000495835 KRT14P02533 472 aa23.43■■□□□ 1.34
HLA-C-209ENST00000495835 RAB40ALP0C0E4 278 aa23.43■■□□□ 1.34
HLA-C-209ENST00000495835 TPBGLP0DKB5 382 aa23.43■■□□□ 1.34
HLA-C-209ENST00000495835 MLNP12872 115 aa23.43■■□□□ 1.34
HLA-C-209ENST00000495835 UGT2B7P16662 529 aa23.43■■□□□ 1.34
HLA-C-209ENST00000495835 MGAT1P26572 445 aa23.43■■□□□ 1.34
HLA-C-209ENST00000495835 PTPN4P29074 926 aa23.43■■□□□ 1.34
HLA-C-209ENST00000495835 ADARP55265 1226 aaKnown RBP23.43■■□□□ 1.34
HLA-C-209ENST00000495835 ERV3-1Q14264 604 aa23.43■■□□□ 1.34
HLA-C-209ENST00000495835 KYNUQ16719 465 aa23.43■■□□□ 1.34
HLA-C-209ENST00000495835 SLC5A12Q1EHB4 618 aa23.43■■□□□ 1.34
HLA-C-209ENST00000495835 RNF187Q5TA31 235 aaPredicted RBP23.43■■□□□ 1.34
HLA-C-209ENST00000495835 PTRHD1Q6GMV3 140 aaKnown RBP23.43■■□□□ 1.34
HLA-C-209ENST00000495835 NAPRTQ6XQN6 538 aa23.43■■□□□ 1.34
HLA-C-209ENST00000495835 SYVN1Q86TM6 617 aa23.43■■□□□ 1.34
HLA-C-209ENST00000495835 DSELQ8IZU8 1212 aa23.43■■□□□ 1.34
HLA-C-209ENST00000495835 MAGOHBQ96A72 148 aaKnown RBP23.43■■□□□ 1.34
HLA-C-209ENST00000495835 SLC22A18Q96BI1 424 aa23.43■■□□□ 1.34
HLA-C-209ENST00000495835 FARSAQ9Y285 508 aaKnown RBP23.43■■□□□ 1.34
HLA-C-209ENST00000495835 TMEM150CB9EJG8 249 aa23.42■■□□□ 1.34
HLA-C-209ENST00000495835 MEN1O00255 615 aa23.42■■□□□ 1.34
HLA-C-209ENST00000495835 SUV39H1O43463 412 aa23.42■■□□□ 1.34
HLA-C-209ENST00000495835 PAMP19021 973 aa23.42■■□□□ 1.34
HLA-C-209ENST00000495835 CYP2A7P20853 494 aa23.42■■□□□ 1.34
HLA-C-209ENST00000495835 RAB28P51157 221 aa23.42■■□□□ 1.34
HLA-C-209ENST00000495835 ITGA1P56199 1179 aa23.42■■□□□ 1.34
HLA-C-209ENST00000495835 GPS1Q13098 491 aa23.42■■□□□ 1.34
HLA-C-209ENST00000495835 GPS2Q13227 327 aa23.42■■□□□ 1.34
HLA-C-209ENST00000495835 ZNF789Q5FWF6 425 aa23.42■■□□□ 1.34
HLA-C-209ENST00000495835 PLEKHS1Q5SXH7 462 aa23.42■■□□□ 1.34
HLA-C-209ENST00000495835 ATG14Q6ZNE5 492 aa23.42■■□□□ 1.34
HLA-C-209ENST00000495835 DCUN1D3Q8IWE4 304 aa23.42■■□□□ 1.34
HLA-C-209ENST00000495835 C19orf47Q8N9M1 422 aaKnown RBP23.42■■□□□ 1.34
HLA-C-209ENST00000495835 SLC38A9Q8NBW4 561 aa23.42■■□□□ 1.34
HLA-C-209ENST00000495835 MCUQ8NE86 351 aa23.42■■□□□ 1.34
HLA-C-209ENST00000495835 OR1L3Q8NH93 324 aa23.42■■□□□ 1.34
HLA-C-209ENST00000495835 GSDMBQ8TAX9 411 aa23.42■■□□□ 1.34
HLA-C-209ENST00000495835 THAP4Q8WY91 577 aa23.42■■□□□ 1.34
HLA-C-209ENST00000495835 MR1Q95460 341 aa23.42■■□□□ 1.34
HLA-C-209ENST00000495835 NRTNQ99748 197 aa23.42■■□□□ 1.34
HLA-C-209ENST00000495835 ACTL8Q9H568 366 aa23.42■■□□□ 1.34
HLA-C-209ENST00000495835 AKIRIN1Q9H9L7 192 aaPredicted RBP23.42■■□□□ 1.34
HLA-C-209ENST00000495835 GRPEL1Q9HAV7 217 aa23.42■■□□□ 1.34
HLA-C-209ENST00000495835 SYBUQ9NX95 663 aa23.42■■□□□ 1.34
HLA-C-209ENST00000495835 A0A0J9YY10 115 aa23.41■■□□□ 1.34
HLA-C-209ENST00000495835 TCRBV7S3A2A0A539 114 aa23.41■■□□□ 1.34
HLA-C-209ENST00000495835 E7EQ34 232 aa23.41■■□□□ 1.34
HLA-C-209ENST00000495835 H3BMM5 538 aa23.41■■□□□ 1.34
HLA-C-209ENST00000495835 CES2O00748 559 aa23.41■■□□□ 1.34
HLA-C-209ENST00000495835 VAPBO95292 243 aa23.41■■□□□ 1.34
HLA-C-209ENST00000495835 RORAP35398 523 aa23.41■■□□□ 1.34
HLA-C-209ENST00000495835 COILP38432 576 aaPredicted RBP23.41■■□□□ 1.34
HLA-C-209ENST00000495835 UGT8Q16880 541 aa23.41■■□□□ 1.34
HLA-C-209ENST00000495835 TYSND1Q2T9J0 566 aa23.41■■□□□ 1.34
HLA-C-209ENST00000495835 KIAA0930Q6ICG6 404 aaPredicted RBP23.41■■□□□ 1.34
HLA-C-209ENST00000495835 TTC27Q6P3X3 843 aa23.41■■□□□ 1.34
HLA-C-209ENST00000495835 FAM199XQ6PEV8 388 aaPredicted RBP23.41■■□□□ 1.34
HLA-C-209ENST00000495835 TTC23LQ6PF05 361 aa23.41■■□□□ 1.34
HLA-C-209ENST00000495835 CDHR3Q6ZTQ4 885 aa23.41■■□□□ 1.34
HLA-C-209ENST00000495835 LDB1Q86U70 411 aaPredicted RBP23.41■■□□□ 1.34
HLA-C-209ENST00000495835 REXO1L1PQ8IX06 675 aa23.41■■□□□ 1.34
HLA-C-209ENST00000495835 GPR135Q8IZ08 494 aa23.41■■□□□ 1.34
HLA-C-209ENST00000495835 FLVCR1-AS1Q8TAF5 88 aa23.41■■□□□ 1.34
HLA-C-209ENST00000495835 C9orf43Q8TAL5 461 aaPredicted RBP23.41■■□□□ 1.34
HLA-C-209ENST00000495835 ACTRT1Q8TDG2 376 aa23.41■■□□□ 1.34
HLA-C-209ENST00000495835 CLIP3Q96DZ5 547 aa23.41■■□□□ 1.34
HLA-C-209ENST00000495835 RNF31Q96EP0 1072 aa23.41■■□□□ 1.34
HLA-C-209ENST00000495835 MFSD3Q96ES6 412 aa23.41■■□□□ 1.34
HLA-C-209ENST00000495835 ACTR5Q9H9F9 607 aaPredicted RBP23.41■■□□□ 1.34
HLA-C-209ENST00000495835 XAB2Q9HCS7 855 aaKnown RBP23.41■■□□□ 1.34
HLA-C-209ENST00000495835 VPS9D1Q9Y2B5 631 aa23.41■■□□□ 1.34
HLA-C-209ENST00000495835 AP1M2Q9Y6Q5 423 aa23.41■■□□□ 1.34
HLA-C-209ENST00000495835 SPTBP11277 2137 aa23.41■■□□□ 1.34
HLA-C-209ENST00000495835 IQCF5A8MTL0 148 aa23.4■■□□□ 1.34
HLA-C-209ENST00000495835 PGRMC1O00264 195 aaKnown RBP23.4■■□□□ 1.34
HLA-C-209ENST00000495835 FKBP9O95302 570 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms