RNA–Protein interactions for RNA: ENST00000494163.1

IFT172-215, Transcript of intraflagellar transport 172, human

TSL 3

Gene IFT172, Length 607 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT172-215	ENST00000494163	ZDHHC12	Q96GR4	267 aa		13.98	□□□□□ -0.17
IFT172-215	ENST00000494163	LIN37	Q96GY3	246 aa	Predicted RBP	13.98	□□□□□ -0.17
IFT172-215	ENST00000494163	CCDC74B	Q96LY2	380 aa		13.98	□□□□□ -0.17
IFT172-215	ENST00000494163	XKR8	Q9H6D3	395 aa		13.98	□□□□□ -0.17
IFT172-215	ENST00000494163	ICK	Q9UPZ9	632 aa		13.98	□□□□□ -0.17
IFT172-215	ENST00000494163	RUVBL2	Q9Y230	463 aa	Known RBP	13.98	□□□□□ -0.17
IFT172-215	ENST00000494163	MTO1	Q9Y2Z2	717 aa	Known RBP	13.98	□□□□□ -0.17
IFT172-215	ENST00000494163		A0A087WUV0	522 aa	Predicted RBP	13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	CCDC187	A0A096LP49	1063 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	PSIP1	O75475	530 aa	Known RBP	13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	FAM155B	O75949	473 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	CAT	P04040	527 aa	Known RBP	13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	ABHD2	P08910	425 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	TPBGL	P0DKB5	382 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	POLR2C	P19387	275 aa	Predicted RBP	13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	SHMT2	P34897	504 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	BDKRB1	P46663	353 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	PGGT1B	P53609	377 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	SLC12A2	P55011	1212 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	IL2	P60568	153 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	POU4F1	Q01851	419 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	PRKAA1	Q13131	559 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	GRB7	Q14451	532 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	SNAP47	Q5SQN1	464 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	ARMC6	Q6NXE6	501 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	IRGC	Q6NXR0	463 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	PIWIL4	Q7Z3Z4	852 aa	Known RBP	13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	MYO1H	Q8N1T3	1032 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	EEF1AKMT1	Q8WVE0	214 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	ASB11	Q8WXH4	323 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	LINGO1	Q96FE5	620 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	TGM7	Q96PF1	710 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	GPR22	Q99680	433 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	TXLNGY	Q9BZA5	131 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	POPDC3	Q9HBV1	291 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	SYTL2	Q9HCH5	934 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	AKAP7	Q9P0M2	348 aa	Predicted RBP	13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	KLHL3	Q9UH77	587 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	SLC39A10	Q9ULF5	831 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	PLAGL1	Q9UM63	463 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	CEP295	Q9C0D2	2601 aa		13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	COL27A1	Q8IZC6	1860 aa	Predicted RBP	13.97	□□□□□ -0.17
IFT172-215	ENST00000494163	ARHGEF33	A8MVX0	844 aa		13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	MATN2	O00339	956 aa		13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	BTN3A3	O00478	584 aa		13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	HGS	O14964	777 aa	Predicted RBP	13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	TOX3	O15405	576 aa	Predicted RBP	13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	PKLR	P30613	574 aa		13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	RAB28	P51157	221 aa		13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	VSNL1	P62760	191 aa		13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	EIF3I	Q13347	325 aa	Known RBP	13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	USP10	Q14694	798 aa	Known RBP	13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	WDR93	Q6P2C0	686 aa		13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	ARHGAP22	Q7Z5H3	698 aa		13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	RASGRP3	Q8IV61	690 aa		13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	ADGRF3	Q8IZF5	1079 aa		13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	NKAP	Q8N5F7	415 aa	Known RBP	13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	RCBTB1	Q8NDN9	531 aa		13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	WDR36	Q8NI36	951 aa	Known RBP	13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	UHMK1	Q8TAS1	419 aa	Known RBP	13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	MRRF	Q96E11	262 aa	Known RBP	13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	TSPAN17	Q96FV3	270 aa		13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	CD180	Q99467	661 aa		13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	NRTN	Q99748	197 aa		13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	CMKLR1	Q99788	373 aa		13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	NRSN2	Q9GZP1	204 aa		13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	OR6C2	Q9NZP2	312 aa		13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
IFT172-215	ENST00000494163		V9GYY5	206 aa	Predicted RBP	13.96	□□□□□ -0.17
IFT172-215	ENST00000494163	TRABD2B	A6NFA1	517 aa		13.95	□□□□□ -0.18
IFT172-215	ENST00000494163		A8MU76	341 aa		13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	GFY	I3L273	518 aa		13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	BTN3A1	O00481	513 aa		13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	RASGRF2	O14827	1237 aa		13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	RIPK2	O43353	540 aa		13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	ZBTB14	O43829	449 aa		13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	TSPAN12	O95859	305 aa		13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	ITGA2B	P08514	1039 aa		13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	ANKRD34C	P0C6C1	535 aa		13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	ZNF37A	P17032	561 aa	Predicted RBP	13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	MAP4	P27816	1152 aa	Known RBP	13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	CSTF2	P33240	577 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	PPP1CA	P62136	330 aa		13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	ZNF460	Q14592	562 aa		13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	C16orf72	Q14CZ0	275 aa		13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	RTP5	Q14D33	572 aa		13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	UAP1	Q16222	522 aa	Predicted RBP	13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	ERCC6L	Q2NKX8	1250 aa		13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	CCSMST1	Q4G0I0	132 aa		13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	CACHD1	Q5VU97	1274 aa		13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	TMEM207	Q6UWW9	146 aa		13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	FAM92B	Q6ZTR7	304 aa		13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	RAB11FIP2	Q7L804	512 aa		13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	PRSS42	Q7Z5A4	293 aa		13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	CEP97	Q8IW35	865 aa		13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	FBXO39	Q8N4B4	442 aa		13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	RAB42	Q8N4Z0	105 aa		13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	FBXO15	Q8NCQ5	510 aa	Predicted RBP	13.95	□□□□□ -0.18
IFT172-215	ENST00000494163	AGBL5	Q8NDL9	886 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms