RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 ATP6V0D1P61421 351 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 ZNF844Q08AG5 666 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 CASP8Q14790 479 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 CEP85LQ5SZL2 805 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 LRIG3Q6UXM1 1119 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 TIFABQ6ZNK6 161 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 GLRX5Q86SX6 157 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 CROCCP2Q86T23 111 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 IQCKQ8N0W5 287 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 RAB42Q8N4Z0 105 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 OR52E1Q8NGJ3 308 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 OR10G6Q8NH81 332 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 MCOLN3Q8TDD5 553 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 LCN9Q8WX39 176 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 JPH3Q8WXH2 748 aaPredicted RBP14.16□□□□□ -0.14
BRCA1-223ENST00000494123 TMEM109Q9BVC6 243 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 TBC1D10AQ9BXI6 508 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 TRIM54Q9BYV2 358 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 ABCG4Q9H172 646 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 NMRAL1Q9HBL8 299 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.16□□□□□ -0.14
BRCA1-223ENST00000494123 CIDEBQ9UHD4 219 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 ADAMTS6Q9UKP5 1117 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 SPAARA0A1B0GVQ0 90 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 NPEPPSL1A6NEC2 478 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 ARHGEF33A8MVX0 844 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 GFYI3L273 518 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 SLC16A5O15375 505 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 RFPL1O75677 317 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 UBXN7O94888 489 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 HIST1H2AGP0C0S8 130 aaPredicted RBP14.15□□□□□ -0.14
BRCA1-223ENST00000494123 CD1DP15813 335 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 AMD1P17707 334 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 HIST1H2ADP20671 130 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 MAGEA12P43365 314 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 OR1D5P58170 312 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 SIM1P81133 766 aaPredicted RBP14.15□□□□□ -0.14
BRCA1-223ENST00000494123 IRF9Q00978 393 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 ILKQ13418 452 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 NR1D2Q14995 579 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 FAM83EQ2M2I3 478 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 AMZ1Q400G9 498 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 KLC3Q6P597 504 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 KLHL35Q6PF15 583 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 FRA10AC1Q70Z53 315 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 SPRED1Q7Z699 444 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 KCTD4Q8WVF5 259 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 ANKRD7Q92527 254 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 HIST1H2AHQ96KK5 128 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 UBXN10Q96LJ8 280 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 HIST1H2AJQ99878 128 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 H2AFJQ9BTM1 129 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 SRMSQ9H3Y6 488 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 PARVBQ9HBI1 364 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 PCMTD2Q9NV79 361 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 EURLQ9NYK6 297 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 PLAGL1Q9UM63 463 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 CDC7O00311 574 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 DUX1O43812 170 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 RPLP0P05388 317 aaKnown RBP14.15□□□□□ -0.14
BRCA1-223ENST00000494123 SHMT2P34897 504 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 GMPRP36959 345 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 CSRP3P50461 194 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 GPLD1P80108 840 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.15□□□□□ -0.14
BRCA1-223ENST00000494123 ADAMTSL2Q86TH1 951 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 CYP4X1Q8N118 509 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 FBXO15Q8NCQ5 510 aaPredicted RBP14.15□□□□□ -0.14
BRCA1-223ENST00000494123 OR4E2Q8NGC2 313 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 MZB1Q8WU39 189 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 NXNL1Q96CM4 212 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 RAB11FIP5Q9BXF6 653 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 SLC12A9Q9BXP2 914 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 CENPHQ9H3R5 247 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 EPB41L1Q9H4G0 881 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 TFB2MQ9H5Q4 396 aaKnown RBP14.15□□□□□ -0.14
BRCA1-223ENST00000494123 XKR8Q9H6D3 395 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 LGALS13Q9UHV8 139 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 LNPEPQ9UIQ6 1025 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 APOBEC2Q9Y235 224 aaKnown RBP14.15□□□□□ -0.14
BRCA1-223ENST00000494123 PCDHGA1Q9Y5H4 931 aa14.15□□□□□ -0.14
BRCA1-223ENST00000494123 IGHV1OR21-1A0A087WYE8 117 aa14.14□□□□□ -0.15
BRCA1-223ENST00000494123 GOLGA6L10A6NI86 522 aa14.14□□□□□ -0.15
BRCA1-223ENST00000494123 GOLGA8RI6L899 631 aa14.14□□□□□ -0.15
BRCA1-223ENST00000494123 GIPC1O14908 333 aa14.14□□□□□ -0.15
BRCA1-223ENST00000494123 RGS16O15492 202 aaPredicted RBP14.14□□□□□ -0.15
BRCA1-223ENST00000494123 KLHL2O95198 593 aa14.14□□□□□ -0.15
BRCA1-223ENST00000494123 KCNK5O95279 499 aa14.14□□□□□ -0.15
BRCA1-223ENST00000494123 PROS1P07225 676 aa14.14□□□□□ -0.15
BRCA1-223ENST00000494123 ENO2P09104 434 aaPredicted RBP14.14□□□□□ -0.15
BRCA1-223ENST00000494123 FTH1P19P0C7X4 201 aa14.14□□□□□ -0.15
BRCA1-223ENST00000494123 PYGBP11216 843 aa14.14□□□□□ -0.15
BRCA1-223ENST00000494123 COL6A2P12110 1019 aa14.14□□□□□ -0.15
BRCA1-223ENST00000494123 TYRP1P17643 537 aa14.14□□□□□ -0.15
BRCA1-223ENST00000494123 RAB28P51157 221 aa14.14□□□□□ -0.15
BRCA1-223ENST00000494123 RP1P56715 2156 aa14.14□□□□□ -0.15
BRCA1-223ENST00000494123 DLG1Q12959 904 aa14.14□□□□□ -0.15
BRCA1-223ENST00000494123 TSNQ15631 228 aaKnown RBP14.14□□□□□ -0.15
BRCA1-223ENST00000494123 TSNAXIP1Q2TAA8 658 aa14.14□□□□□ -0.15
BRCA1-223ENST00000494123 CCSMST1Q4G0I0 132 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms