RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 NLRP9Q7RTR0 991 aa12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 LDB1Q86U70 411 aaPredicted RBP12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 TRIM73Q86UV7 250 aa12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 ATCAYQ86WG3 371 aa12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 VRK3Q8IV63 474 aa12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 DSELQ8IZU8 1212 aa12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 OR5AR1Q8NGP9 310 aa12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 OR1L3Q8NH93 324 aa12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 FLVCR1-AS1Q8TAF5 88 aa12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 HDAC10Q969S8 669 aa12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 TCTN2Q96GX1 697 aa12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 DPH2Q9BQC3 489 aaPredicted RBP12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 NLNQ9BYT8 704 aa12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 CHST8Q9H2A9 424 aa12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 CASS4Q9NQ75 786 aa12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 TDRKHQ9Y2W6 561 aaKnown RBP12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 SLC5A10A0PJK1 596 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 DNAJB5O75953 348 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 PDGFAP04085 211 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 RPN2P04844 631 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 CD63P08962 238 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 PEBP1P30086 187 aaKnown RBP12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 RPL22P35268 128 aaKnown RBP12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 CCL11P51671 97 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 CRADDP78560 199 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 ZIC1Q15915 447 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 FASTKD1Q53R41 847 aaKnown RBP12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 PLEKHS1Q5SXH7 462 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 TSTD2Q5T7W7 516 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 ZNF517Q6ZMY9 492 aaPredicted RBP12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 SPNS2Q8IVW8 549 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 TMEM151BQ8IW70 566 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 OR6P1Q8NGX9 317 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 GSDMBQ8TAX9 411 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 TRAPPC9Q96Q05 1148 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 SLC25A23Q9BV35 468 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 TRIM55Q9BYV6 548 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 PITPNM3Q9BZ71 974 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 ING2Q9H160 280 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 FAM60AQ9NP50 221 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 RAB6BQ9NRW1 208 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 IRAK4Q9NWZ3 460 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 SPHK1Q9NYA1 384 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 MARCH4Q9P2E8 410 aaPredicted RBP12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 GPN3Q9UHW5 284 aaPredicted RBP12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 PLAGL1Q9UM63 463 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 CDYLQ9Y232 598 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 PADI2Q9Y2J8 665 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 AP1M2Q9Y6Q5 423 aa12.96□□□□□ -0.33
CTDSP1-212ENST00000494067 SPTBP11277 2137 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 ARGFXA6NJG6 315 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 IQCF5A8MTL0 148 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 ISM1B1AKI9 464 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 H3BMH7 237 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 AP3B1O00203 1094 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 CAPN1P07384 714 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 RORAP35398 523 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 PGDP52209 483 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 RRADP55042 308 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 FOXK1P85037 733 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 CCZ1BP86790 482 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 CCZ1P86791 482 aaPredicted RBP12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 AARS2Q5JTZ9 985 aaKnown RBP12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 CPZQ66K79 652 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 SPESP1Q6UW49 350 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 C4orf22Q6V702 233 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 UNC5AQ6ZN44 842 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 CDHR3Q6ZTQ4 885 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 SYTL1Q8IYJ3 562 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 EFCAB3Q8N7B9 438 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 ENDOVQ8N8Q3 282 aaKnown RBP12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 PPHLN1Q8NEY8 458 aaKnown RBP12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 OR4L1Q8NH43 312 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 OR5K2Q8NHB8 316 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 RANBP9Q96S59 729 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 OR6C2Q9NZP2 312 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 PAK5Q9P286 719 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 CIDEBQ9UHD4 219 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 TCFL5Q9UL49 500 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 RIMKLBQ9ULI2 386 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 TCAF1Q9Y4C2 921 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 MAST4O15021 2626 aa12.95□□□□□ -0.34
CTDSP1-212ENST00000494067 TCRBV7S3A2A0A539 114 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 ZNF749O43361 778 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 OR2B3O76000 313 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 TMEM63AO94886 807 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 APOA4P06727 396 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 APRTP07741 180 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 CCR7P32248 378 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 KCNJ1P48048 391 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 GABRA4P48169 554 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 CSE1LP55060 971 aaKnown RBP12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 TMED2Q15363 201 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 RPS6KA1Q15418 735 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 IGFBP7Q16270 282 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 DEFB110Q30KQ9 67 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 DNAJC21Q5F1R6 531 aaKnown RBP12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 TTC23LQ6PF05 361 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 FAM198BQ6UWH4 519 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 MED25Q71SY5 747 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms