RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 BHMG1C9JSJ3 638 aaPredicted RBP12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 PYCARD-AS1I3L0S3 204 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 AP2A2O94973 939 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 FURINP09958 794 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 PRKAR1AP10644 381 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 PAMP19021 973 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 POLR2CP19387 275 aaPredicted RBP12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 ACADLP28330 430 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 DLSTP36957 453 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 CD151P48509 253 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 PRAMEP78395 509 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 HSD11B2P80365 405 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 DHX9Q08211 1270 aaKnown RBP12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 CDC20Q12834 499 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 NFATC3Q12968 1075 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 RPA4Q13156 261 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 BOP1Q14137 746 aaKnown RBP12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 GPR19Q15760 415 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 HP1BP3Q5SSJ5 553 aaPredicted RBP12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 TSTD2Q5T7W7 516 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 BORAQ6PGQ7 559 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 PACS1Q6VY07 963 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 CEP128Q6ZU80 1094 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 OOSP2Q86WS3 158 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 PPP1R3BQ86XI6 285 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 KMT5CQ86Y97 462 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 RASGRP3Q8IV61 690 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 MPP5Q8N3R9 675 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 SIDT2Q8NBJ9 832 aaKnown RBP12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 SLC38A9Q8NBW4 561 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 ACVR1CQ8NER5 493 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 LCN9Q8WX39 176 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 SEC14L1Q92503 715 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 KIAA1143Q96AT1 154 aaPredicted RBP12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 LRRC39Q96DD0 335 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 STAMBPL1Q96FJ0 436 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 PWWP2AQ96N64 755 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 FERD3LQ96RJ6 166 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 RUFY1Q96T51 708 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 FMO2Q99518 471 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 ARHGAP9Q9BRR9 750 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 NAT9Q9BTE0 207 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 TSPYL1Q9H0U9 437 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 SAYSD1Q9NPB0 183 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 CHRAC1Q9NRG0 131 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 FGF21Q9NSA1 209 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 LNPEPQ9UIQ6 1025 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 CROTQ9UKG9 612 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 RIMKLBQ9ULI2 386 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 BTRCQ9Y297 605 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 COLEC10Q9Y6Z7 277 aa12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 SPENQ96T58 3664 aaKnown RBP12.32□□□□□ -0.44
SEC61A1-206ENST00000491668 UBA6A0AVT1 1052 aaPredicted RBP12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 SLC5A10A0PJK1 596 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 SLC9B1P1A6NJY1 282 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 BTN3A1O00481 513 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 BANF1O75531 89 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 ZBTB11O95625 1053 aaPredicted RBP12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 GOT2P00505 430 aaKnown RBP12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 NTRK1P04629 796 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 NSG1P42857 185 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 MAGEA3P43357 314 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 CARSP49589 748 aaKnown RBP12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 POLE2P56282 527 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 PRKG2Q13237 762 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 ITIH4Q14624 930 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 ZNF789Q5FWF6 425 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 PRAMEF17Q5VTA0 474 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 ARMC3Q5W041 872 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 ZDHHC24Q6UX98 284 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 ANKMY2Q8IV38 441 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 ZBED8Q8IZ13 594 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 ADGRF3Q8IZF5 1079 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 OTUD6BQ8N6M0 293 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 OR52E1Q8NGJ3 308 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 OR6P1Q8NGX9 317 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 FLVCR1-AS1Q8TAF5 88 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 LKAAEAR1Q8TD35 194 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 PYROXD1Q8WU10 500 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 CT55Q8WUE5 264 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 TFGQ92734 400 aaPredicted RBP12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 ZNF669Q96BR6 464 aaPredicted RBP12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 ZNF501Q96CX3 271 aaPredicted RBP12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 CFAP36Q96G28 342 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 HGH1Q9BTY7 390 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 KIFC1Q9BW19 673 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 PITPNM3Q9BZ71 974 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 TWSG1Q9GZX9 223 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 SRMSQ9H3Y6 488 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 TFB2MQ9H5Q4 396 aaKnown RBP12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 XKR8Q9H6D3 395 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 MRM3Q9HC36 420 aaKnown RBP12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 MARCH4Q9P2E8 410 aaPredicted RBP12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 RARRES3Q9UL19 164 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 NFU1Q9UMS0 254 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 SOX13Q9UN79 622 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 ICKQ9UPZ9 632 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 CHMP2BQ9UQN3 213 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 HEBP2Q9Y5Z4 205 aa12.31□□□□□ -0.44
SEC61A1-206ENST00000491668 COL12A1Q99715 3063 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms