RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 SEMA5BQ9P283 1151 aa7.12□□□□□ -1.27
PRPF4B-208ENST00000490653 EPHA6Q9UF33 1036 aa7.12□□□□□ -1.27
PRPF4B-208ENST00000490653 DMGDHQ9UI17 866 aaKnown RBP7.12□□□□□ -1.27
PRPF4B-208ENST00000490653 SLC24A2Q9UI40 661 aa7.12□□□□□ -1.27
PRPF4B-208ENST00000490653 CROTQ9UKG9 612 aa7.12□□□□□ -1.27
PRPF4B-208ENST00000490653 IGLV3-16A0A075B6K0 115 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 TCRBV7S3A2A0A539 114 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 GOLGA6L9A6NEM1 432 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 OR5K3A6NET4 321 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 MROH6A6NGR9 719 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 SLC9B1P1A6NJY1 282 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 IQCF5A8MTL0 148 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 H7C0S8 307 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 HCRTR1O43613 425 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 KATNA1O75449 491 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 STK10O94804 968 aaKnown RBP7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 IFNB1P01574 187 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 PTMAP06454 111 aaKnown RBP7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 CTSBP07858 339 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 FGF5P12034 268 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 PVRP15151 417 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 VCLP18206 1134 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 NELFEP18615 380 aaKnown RBP7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 ITGALP20701 1170 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 PSMA3P25788 255 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 ACRV1P26436 265 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 MAP4P27816 1152 aaKnown RBP7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 GRNP28799 593 aaKnown RBP7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 FOXN2P32314 431 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 DLSTP36957 453 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 CAPZBP47756 277 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 PRLHRP49683 370 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 CSE1LP55060 971 aaKnown RBP7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 ERV3-1Q14264 604 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 PLCL1Q15111 1095 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 GPR19Q15760 415 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 FAM69BQ5VUD6 431 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 CES3Q6UWW8 571 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 C6orf15Q6UXA7 325 aaPredicted RBP7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 ZNF534Q76KX8 674 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 PRSS42Q7Z5A4 293 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 RASGRP3Q8IV61 690 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 TMEM151BQ8IW70 566 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 FAM20CQ8IXL6 584 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 RNF10Q8N5U6 811 aaKnown RBP7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 SLC38A9Q8NBW4 561 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 OR13J1Q8NGT2 312 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 LKAAEAR1Q8TD35 194 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 STYXQ8WUJ0 223 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 HDAC10Q969S8 669 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 DCUN1D1Q96GG9 259 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 ZDHHC12Q96GR4 267 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 SLC45A3Q96JT2 553 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 SLC41A2Q96JW4 573 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 COPS8Q99627 209 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 CCM2Q9BSQ5 444 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 RAB33BQ9H082 229 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 EPB41L1Q9H4G0 881 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 LRRC40Q9H9A6 602 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 COG4Q9H9E3 785 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 GPN2Q9H9Y4 310 aaPredicted RBP7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 LZTFL1Q9NQ48 299 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 ZNF71Q9NQZ8 489 aaPredicted RBP7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 SMARCAL1Q9NZC9 954 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 ANKMY1Q9P2S6 941 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 ACSL5Q9ULC5 683 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 ZNF148Q9UQR1 794 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 RPS6KL1Q9Y6S9 549 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 CCDC88CQ9P219 2028 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 DOPEY2Q9Y3R5 2298 aa7.11□□□□□ -1.27
PRPF4B-208ENST00000490653 ZNF891A8MT65 544 aaPredicted RBP7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 BTN3A1O00481 513 aa7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 PSMD3O43242 534 aa7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 GOT2P00505 430 aaKnown RBP7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 F7P08709 466 aaPredicted RBP7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 ST6GAL1P15907 406 aa7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 NR1D1P20393 614 aa7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 MSNP26038 577 aaKnown RBP7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 ACADLP28330 430 aa7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 PRDX3P30048 256 aaKnown RBP7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 CXCR5P32302 372 aa7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 HADHAP40939 763 aa7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 STAT5AP42229 794 aa7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 RPS18P62269 152 aaKnown RBP7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 CRADDP78560 199 aa7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 CCZ1BP86790 482 aa7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 CCZ1P86791 482 aaPredicted RBP7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 CACNG1Q06432 222 aa7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 ABHD18Q0P651 414 aa7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 RPS6KA1Q15418 735 aa7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 IGFBP7Q16270 282 aa7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 SKIDA1Q1XH10 827 aa7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 P3H1Q32P28 736 aa7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 TSTD2Q5T7W7 516 aa7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 TRIM73Q86UV7 250 aa7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 VRK3Q8IV63 474 aa7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 RBM12BQ8IXT5 1001 aaKnown RBP7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 ADGRF3Q8IZF5 1079 aa7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 KRT222Q8N1A0 295 aa7.1□□□□□ -1.27
PRPF4B-208ENST00000490653 D2HGDHQ8N465 521 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms