RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 KRT33BQ14525 404 aa3.2□□□□□ -1.9
HMGN1-218ENST00000490032 NR1D2Q14995 579 aa3.2□□□□□ -1.9
HMGN1-218ENST00000490032 HLA-BQ31612 363 aa3.2□□□□□ -1.9
HMGN1-218ENST00000490032 KLHL26Q53HC5 615 aa3.2□□□□□ -1.9
HMGN1-218ENST00000490032 GORABQ5T7V8 394 aa3.2□□□□□ -1.9
HMGN1-218ENST00000490032 AZIN2Q96A70 460 aa3.2□□□□□ -1.9
HMGN1-218ENST00000490032 PIGQQ9BRB3 760 aa3.2□□□□□ -1.9
HMGN1-218ENST00000490032 DPAGT1Q9H3H5 408 aa3.2□□□□□ -1.9
HMGN1-218ENST00000490032 KCNK15Q9H427 330 aa3.2□□□□□ -1.9
HMGN1-218ENST00000490032 FGF21Q9NSA1 209 aa3.2□□□□□ -1.9
HMGN1-218ENST00000490032 KRT84Q9NSB2 600 aa3.2□□□□□ -1.9
HMGN1-218ENST00000490032 SEPT11Q9NVA2 429 aaKnown RBP3.2□□□□□ -1.9
HMGN1-218ENST00000490032 OSER1Q9NX31 292 aa3.2□□□□□ -1.9
HMGN1-218ENST00000490032 SEC63Q9UGP8 760 aaKnown RBP3.2□□□□□ -1.9
HMGN1-218ENST00000490032 GRID1Q9ULK0 1009 aa3.2□□□□□ -1.9
HMGN1-218ENST00000490032 NME7Q9Y5B8 376 aa3.2□□□□□ -1.9
HMGN1-218ENST00000490032 CROCCQ5TZA2 2017 aa3.2□□□□□ -1.9
HMGN1-218ENST00000490032 HYKKA2RU49 373 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.19□□□□□ -1.9
HMGN1-218ENST00000490032 PAPSS1O43252 624 aaPredicted RBP3.19□□□□□ -1.9
HMGN1-218ENST00000490032 OR10H2O60403 315 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 NXPH2O95156 264 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 IGHV4-31P0DP07 118 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 ACSL1P33121 698 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 PDX1P52945 283 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 GSCP56915 257 aaPredicted RBP3.19□□□□□ -1.9
HMGN1-218ENST00000490032 HUNKP57058 714 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 DCAF7P61962 342 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 SIRPAP78324 504 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 RIGQ13278 110 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 IRF3Q14653 427 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 HSP90AB4PQ58FF6 505 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 PAQR6Q6TCH4 344 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 Q6ZRP5 223 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 HAUS6Q7Z4H7 955 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 LDB1Q86U70 411 aaPredicted RBP3.19□□□□□ -1.9
HMGN1-218ENST00000490032 CDC20BQ86Y33 519 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 FAM114A1Q8IWE2 563 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 KIRREL3Q8IZU9 778 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 NIPA2Q8N8Q9 360 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 OR2AJ1Q8NGZ0 328 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 IRGQQ8WZA9 623 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 GTF3AQ92664 365 aaKnown RBP3.19□□□□□ -1.9
HMGN1-218ENST00000490032 NEK1Q96PY6 1258 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 USP28Q96RU2 1077 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 LMF2Q9BU23 707 aaKnown RBP3.19□□□□□ -1.9
HMGN1-218ENST00000490032 WWTR1Q9GZV5 400 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 SPATC1LQ9H0A9 340 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 CPVLQ9H3G5 476 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 HACL1Q9UJ83 578 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 GRIP1Q9Y3R0 1128 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 ZHX2Q9Y6X8 837 aa3.19□□□□□ -1.9
HMGN1-218ENST00000490032 EPM2AB3EWF7 344 aa3.18□□□□□ -1.9
HMGN1-218ENST00000490032 XRCC3O43542 346 aa3.18□□□□□ -1.9
HMGN1-218ENST00000490032 MED24O75448 989 aa3.18□□□□□ -1.9
HMGN1-218ENST00000490032 ACADSP16219 412 aa3.18□□□□□ -1.9
HMGN1-218ENST00000490032 HADHAP40939 763 aa3.18□□□□□ -1.9
HMGN1-218ENST00000490032 ARSEP51690 589 aa3.18□□□□□ -1.9
HMGN1-218ENST00000490032 CDK3Q00526 305 aa3.18□□□□□ -1.9
HMGN1-218ENST00000490032 NECTIN1Q15223 517 aa3.18□□□□□ -1.9
HMGN1-218ENST00000490032 ITPRIPL2Q3MIP1 535 aa3.18□□□□□ -1.9
HMGN1-218ENST00000490032 PDLIM3Q53GG5 364 aaPredicted RBP3.18□□□□□ -1.9
HMGN1-218ENST00000490032 TAF1BQ53T94 588 aaPredicted RBP3.18□□□□□ -1.9
HMGN1-218ENST00000490032 WLSQ5T9L3 541 aa3.18□□□□□ -1.9
HMGN1-218ENST00000490032 C20orf194Q5TEA3 1177 aa3.18□□□□□ -1.9
HMGN1-218ENST00000490032 CCDC70Q6NSX1 233 aa3.18□□□□□ -1.9
HMGN1-218ENST00000490032 FIGLAQ6QHK4 219 aa3.18□□□□□ -1.9
HMGN1-218ENST00000490032 HOGA1Q86XE5 327 aa3.18□□□□□ -1.9
HMGN1-218ENST00000490032 CEP57L1Q8IYX8 460 aa3.18□□□□□ -1.9
HMGN1-218ENST00000490032 OR10G8Q8NGN5 311 aa3.18□□□□□ -1.9
HMGN1-218ENST00000490032 PHLDA1Q8WV24 401 aaPredicted RBP3.18□□□□□ -1.9
HMGN1-218ENST00000490032 SLCO2A1Q92959 643 aa3.18□□□□□ -1.9
HMGN1-218ENST00000490032 OMA1Q96E52 524 aa3.18□□□□□ -1.9
HMGN1-218ENST00000490032 LRRC61Q9BV99 259 aa3.18□□□□□ -1.9
HMGN1-218ENST00000490032 FTOQ9C0B1 505 aaKnown RBP eCLIP3.18□□□□□ -1.9
HMGN1-218ENST00000490032 EPHA6Q9UF33 1036 aa3.18□□□□□ -1.9
HMGN1-218ENST00000490032 TUBE1Q9UJT0 475 aa3.18□□□□□ -1.9
HMGN1-218ENST00000490032 PLAGL1Q9UM63 463 aa3.18□□□□□ -1.9
HMGN1-218ENST00000490032 ZNF148Q9UQR1 794 aa3.18□□□□□ -1.9
HMGN1-218ENST00000490032 ABCA7Q8IZY2 2146 aa3.17□□□□□ -1.9
HMGN1-218ENST00000490032 CCDC189A1A4V9 331 aa3.17□□□□□ -1.9
HMGN1-218ENST00000490032 C15orf61A6NNL5 157 aa3.17□□□□□ -1.9
HMGN1-218ENST00000490032 SOCS3O14543 225 aa3.17□□□□□ -1.9
HMGN1-218ENST00000490032 PTP4A3O75365 173 aa3.17□□□□□ -1.9
HMGN1-218ENST00000490032 PSMB10P40306 273 aa3.17□□□□□ -1.9
HMGN1-218ENST00000490032 OPRL1P41146 370 aa3.17□□□□□ -1.9
HMGN1-218ENST00000490032 LEPRP48357 1165 aaKnown RBP3.17□□□□□ -1.9
HMGN1-218ENST00000490032 PNLIPRP2P54317 469 aa3.17□□□□□ -1.9
HMGN1-218ENST00000490032 MFAP4P55083 255 aa3.17□□□□□ -1.9
HMGN1-218ENST00000490032 MAZP56270 477 aaKnown RBP3.17□□□□□ -1.9
HMGN1-218ENST00000490032 TMF1P82094 1093 aa3.17□□□□□ -1.9
HMGN1-218ENST00000490032 ELAVL2Q12926 359 aaKnown RBP3.17□□□□□ -1.9
HMGN1-218ENST00000490032 NFATC2Q13469 925 aa3.17□□□□□ -1.9
HMGN1-218ENST00000490032 GRAPQ13588 217 aa3.17□□□□□ -1.9
HMGN1-218ENST00000490032 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
HMGN1-218ENST00000490032 ZNF774Q6NX45 483 aa3.17□□□□□ -1.9
HMGN1-218ENST00000490032 ZNF343Q6P1L6 599 aa3.17□□□□□ -1.9
HMGN1-218ENST00000490032 PTAR1Q7Z6K3 402 aaPredicted RBP3.17□□□□□ -1.9
HMGN1-218ENST00000490032 AACSQ86V21 672 aa3.17□□□□□ -1.9
HMGN1-218ENST00000490032 COMMD2Q86X83 199 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms