RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 MT-ND3P03897 115 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 FGF5P12034 268 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 ARL4CP56559 192 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 CTBP1Q13363 440 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 TTLL9Q3SXZ7 439 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.85□□□□□ -0.19
BRCA1-218ENST00000489037 CTSL3PQ5NE16 218 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 INO80CQ6PI98 192 aaPredicted RBP13.85□□□□□ -0.19
BRCA1-218ENST00000489037 UNC5AQ6ZN44 842 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 CENPUQ71F23 418 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 KCNMB4Q86W47 210 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 VRK3Q8IV63 474 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 DCUN1D3Q8IWE4 304 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 D2HGDHQ8N465 521 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 ESX1Q8N693 406 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 BIRC8Q96P09 236 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 FCRL4Q96PJ5 515 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 TRIM51Q9BSJ1 452 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 SYTL2Q9HCH5 934 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 FGF21Q9NSA1 209 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 PILRAQ9UKJ1 303 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 SLC39A10Q9ULF5 831 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 ICKQ9UPZ9 632 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 CDYLQ9Y232 598 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 TMEM184BQ9Y519 407 aaPredicted RBP13.85□□□□□ -0.19
BRCA1-218ENST00000489037 COMMD10Q9Y6G5 202 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 SNRNP200O75643 2136 aaKnown RBP13.85□□□□□ -0.19
BRCA1-218ENST00000489037 CELSR3Q9NYQ7 3312 aa13.85□□□□□ -0.19
BRCA1-218ENST00000489037 CHD6Q8TD26 2715 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 FAM187AA6NFU0 413 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 SLC9B1P1A6NJY1 282 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 EIF4E1BA6NMX2 242 aaKnown RBP13.84□□□□□ -0.19
BRCA1-218ENST00000489037 ISM1B1AKI9 464 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 NIPSNAP2O75323 286 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 SPAG6O75602 509 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 S1PR4O95977 384 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 CCNYL3P0C7X3 344 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 EBLN1P0CF75 366 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 FOLR1P15328 257 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 IVDP26440 423 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 CCNFP41002 786 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 RAB28P51157 221 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 ITGA8P53708 1063 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 TUBB4BP68371 445 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 RHDQ02161 417 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 CALCOCO2Q13137 446 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 TUBB2AQ13885 445 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 MAP7Q14244 749 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 KCNAB1Q14722 419 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 CRYMQ14894 314 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 HIF1AQ16665 826 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 HSP90AA5PQ58FG0 334 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 HIBCHQ6NVY1 386 aaPredicted RBP13.84□□□□□ -0.19
BRCA1-218ENST00000489037 VASH2Q86V25 355 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 ADGRF3Q8IZF5 1079 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 ZBTB2Q8N680 514 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 SPATA4Q8NEY3 305 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 OR8K5Q8NH50 307 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 N4BP2L2Q92802 583 aaPredicted RBP13.84□□□□□ -0.19
BRCA1-218ENST00000489037 RAD51AP1Q96B01 352 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 SLC22A18Q96BI1 424 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 LRRC39Q96DD0 335 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 UBL7Q96S82 380 aaPredicted RBP13.84□□□□□ -0.19
BRCA1-218ENST00000489037 TUBB2BQ9BVA1 445 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 RAB11FIP5Q9BXF6 653 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 PPANQ9NQ55 473 aaKnown RBP13.84□□□□□ -0.19
BRCA1-218ENST00000489037 FBXO6Q9NRD1 293 aaPredicted RBP13.84□□□□□ -0.19
BRCA1-218ENST00000489037 IARS2Q9NSE4 1012 aaKnown RBP13.84□□□□□ -0.19
BRCA1-218ENST00000489037 LNPEPQ9UIQ6 1025 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 FBXO5Q9UKT4 447 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 BTRCQ9Y297 605 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 ZFYVE26Q68DK2 2539 aa13.84□□□□□ -0.19
BRCA1-218ENST00000489037 SEC16AO15027 2179 aa13.83□□□□□ -0.19
BRCA1-218ENST00000489037 LAMA5O15230 3695 aa13.83□□□□□ -0.2
BRCA1-218ENST00000489037 ANKRD12Q6UB98 2062 aa13.83□□□□□ -0.2
BRCA1-218ENST00000489037 EFSO43281 561 aa13.83□□□□□ -0.2
BRCA1-218ENST00000489037 KIAA0754O94854 1291 aa13.83□□□□□ -0.2
BRCA1-218ENST00000489037 SEC31AO94979 1220 aaKnown RBP13.83□□□□□ -0.2
BRCA1-218ENST00000489037 CHRM5P08912 532 aaPredicted RBP13.83□□□□□ -0.2
BRCA1-218ENST00000489037 ATP5DP30049 168 aa13.83□□□□□ -0.2
BRCA1-218ENST00000489037 SLC1A2P43004 574 aa13.83□□□□□ -0.2
BRCA1-218ENST00000489037 CKAP4Q07065 602 aaKnown RBP13.83□□□□□ -0.2
BRCA1-218ENST00000489037 ABHD18Q0P651 414 aa13.83□□□□□ -0.2
BRCA1-218ENST00000489037 KIR2DS3Q14952 304 aa13.83□□□□□ -0.2
BRCA1-218ENST00000489037 KYNUQ16719 465 aa13.83□□□□□ -0.2
BRCA1-218ENST00000489037 UGT3A1Q6NUS8 523 aa13.83□□□□□ -0.2
BRCA1-218ENST00000489037 FBXO38Q6PIJ6 1188 aa13.83□□□□□ -0.2
BRCA1-218ENST00000489037 SPESP1Q6UW49 350 aa13.83□□□□□ -0.2
BRCA1-218ENST00000489037 C6orf15Q6UXA7 325 aaPredicted RBP13.83□□□□□ -0.2
BRCA1-218ENST00000489037 DENND6AQ8IWF6 608 aa13.83□□□□□ -0.2
BRCA1-218ENST00000489037 AGGF1Q8N302 714 aaeCLIP13.83□□□□□ -0.2
BRCA1-218ENST00000489037 FAM136AQ96C01 138 aa13.83□□□□□ -0.2
BRCA1-218ENST00000489037 GPN2Q9H9Y4 310 aaPredicted RBP13.83□□□□□ -0.2
BRCA1-218ENST00000489037 LATS2Q9NRM7 1088 aa13.83□□□□□ -0.2
BRCA1-218ENST00000489037 ZC3H7BQ9UGR2 993 aaKnown RBP13.83□□□□□ -0.2
BRCA1-218ENST00000489037 PLAGL1Q9UM63 463 aa13.83□□□□□ -0.2
BRCA1-218ENST00000489037 SNX24Q9Y343 169 aa13.83□□□□□ -0.2
BRCA1-218ENST00000489037 FANCGO15287 622 aa13.82□□□□□ -0.2
BRCA1-218ENST00000489037 VPS26AO75436 327 aa13.82□□□□□ -0.2
BRCA1-218ENST00000489037 BANF1O75531 89 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms