RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 PTPRKQ15262 1439 aa3.66□□□□□ -1.82
ECHDC1-217ENST00000488087 SYNMO15061 1565 aa3.66□□□□□ -1.82
ECHDC1-217ENST00000488087 UNC13AQ9UPW8 1703 aa3.66□□□□□ -1.82
ECHDC1-217ENST00000488087 CNTNAP2Q9UHC6 1331 aa3.66□□□□□ -1.82
ECHDC1-217ENST00000488087 PLB1Q6P1J6 1458 aa3.66□□□□□ -1.82
ECHDC1-217ENST00000488087 ROCK1Q13464 1354 aa3.65□□□□□ -1.82
ECHDC1-217ENST00000488087 USP47Q96K76 1375 aa3.65□□□□□ -1.82
ECHDC1-217ENST00000488087 PRSS51A0A1B0GVH4 220 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 C5orf60A6NFR6 353 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 MAGEB17A8MXT2 336 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 BMPR1BO00238 502 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 UBE2CO00762 179 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 CTAGE5O15320 804 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 HTATSF1O43719 755 aaKnown RBP3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 CTSVO60911 334 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 IGLV2-11P01706 119 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 IGHV4-39P01824 125 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 IGHDP01880 384 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 H1F0P07305 194 aaKnown RBP3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 IVLP07476 585 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 MYBL1P10243 752 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 CKMT2P17540 419 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 HOXC13P31276 330 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 GABRA5P31644 462 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 MMP15P51511 669 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 TPM4P67936 248 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 IRX1P78414 480 aaPredicted RBP3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 SNTB1Q13884 538 aaKnown RBP3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 RBBP5Q15291 538 aaKnown RBP3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 KYNUQ16719 465 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 TTC31Q49AM3 519 aaPredicted RBP3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 FAM109BQ6ICB4 259 aaPredicted RBP3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 RPUSD3Q6P087 351 aaKnown RBP3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 SLC26A9Q7LBE3 791 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 TRMT1LQ7Z2T5 733 aaKnown RBP3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 NFE4Q86UQ8 179 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 ERLEC1Q96DZ1 483 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 ST6GAL2Q96JF0 529 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 ZMAT2Q96NC0 199 aaKnown RBP3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 NEK1Q96PY6 1258 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 SLC22A12Q96S37 553 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 TRMT61BQ9BVS5 477 aaKnown RBP3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 FNDC11Q9BVV2 318 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 MOV10L1Q9BXT6 1211 aaKnown RBP3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 TEX13AQ9BXU3 409 aaPredicted RBP3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 MBNL1Q9NR56 388 aaKnown RBP3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 ZFP57Q9NU63 452 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 FAM118AQ9NWS6 357 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 ZNF446Q9NWS9 450 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 GDE1Q9NZC3 331 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 IL17BQ9UHF5 180 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 DDX25Q9UHL0 483 aaKnown RBP3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 GRIN2AQ12879 1464 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 SNAPC4Q5SXM2 1469 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 ZNF541Q9H0D2 1346 aa3.65□□□□□ -1.83
ECHDC1-217ENST00000488087 GPRASP1Q5JY77 1395 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 ANKRD50Q9ULJ7 1429 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 LAMC1P11047 1609 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 TRBC2A0A5B9 178 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 FAM172BPA6NC97 362 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 H7C0S8 307 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 KIF2AO00139 706 aaPredicted RBP3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 P2RY10O00398 339 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 TO15178 435 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 SYNCRIPO60506 623 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 GCNT3O95395 438 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 LDLRP01130 860 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 NR3C1P04150 777 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 H2AFXP16104 143 aaPredicted RBP3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 DNASE1P24855 282 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 RPS18P62269 152 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 PHEXP78562 749 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 PRKAA1Q13131 559 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 ALCAMQ13740 583 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 NR1D2Q14995 579 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 SNAPC1Q16533 368 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 CRY2Q49AN0 593 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 TMEM211Q6ICI0 200 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 PLBD1Q6P4A8 553 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 TEX38Q6PEX7 206 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 CEP57Q86XR8 500 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 CIARTQ8N365 385 aaPredicted RBP3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 OR10S1Q8NGN2 331 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 LRRC8CQ8TDW0 803 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 DAZLQ92904 295 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 EXOC4Q96A65 974 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 ALG14Q96F25 216 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 STAMBPL1Q96FJ0 436 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 PGAP3Q96FM1 320 aaPredicted RBP3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 ERO1AQ96HE7 468 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 RADILQ96JH8 1075 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 ZNF354BQ96LW1 612 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 UHRF2Q96PU4 802 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 OR6C1Q96RD1 312 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 NODALQ96S42 347 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 PAIP2Q9BPZ3 127 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 FAM107BQ9H098 131 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 OR10A4Q9H209 315 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 MMP28Q9H239 520 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms