RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 TBC1D3GQ6DHY5 549 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 TBC1D3CQ6IPX1 549 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 OGFOD2Q6N063 350 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 FAM124AQ86V42 546 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 DDIASQ8IXT1 998 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 TBC1D3Q8IZP1 549 aaPredicted RBP9.2□□□□□ -0.94
SF3B1-211ENST00000487698 POU5F2Q8N7G0 328 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 RBM15BQ8NDT2 890 aaKnown RBP9.2□□□□□ -0.94
SF3B1-211ENST00000487698 CFAP61Q8NHU2 1237 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 CMTM5Q96DZ9 223 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 CCDC138Q96M89 665 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 CCT7Q99832 543 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 CADM1Q9BY67 442 aaKnown RBP9.2□□□□□ -0.94
SF3B1-211ENST00000487698 C1orf21Q9H246 121 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 OR52A5Q9H2C5 316 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 SLC40A1Q9NP59 571 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 MRGBPQ9NV56 204 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 USP36Q9P275 1121 aaKnown RBP9.2□□□□□ -0.94
SF3B1-211ENST00000487698 SLC23A2Q9UGH3 650 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 TRPS1Q9UHF7 1281 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 SLC17A4Q9Y2C5 497 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 PRKAB1Q9Y478 270 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 KLHL33A6NCF5 533 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 B2RBV5 119 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 CHURC1-FNTBB4DL54 471 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 H0YHG0 523 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 KMOO15229 486 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 KATNA1O75449 491 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 RASSF9O75901 435 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 C1orf105O95561 183 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 IGLV3-19P01714 112 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 FUCA1P04066 466 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 COX4I1P13073 169 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 MAP4P27816 1152 aaKnown RBP9.2□□□□□ -0.94
SF3B1-211ENST00000487698 MAT2AP31153 395 aaKnown RBP9.2□□□□□ -0.94
SF3B1-211ENST00000487698 ACSL1P33121 698 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 CPOXP36551 454 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 HTR6P50406 440 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 PFN3P60673 137 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 PTK2BQ14289 1009 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 SQLEQ14534 574 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 PUS10Q3MIT2 529 aaKnown RBP9.2□□□□□ -0.94
SF3B1-211ENST00000487698 GGTA1PQ4G0N0 100 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 ZNF852Q6ZMS4 543 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 MILR1Q7Z6M3 343 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 PDZD3Q86UT5 571 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 AMZ2Q86W34 360 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 DENND6BQ8NEG7 585 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 OR2T11Q8NH01 316 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 METTL6Q8TCB7 284 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 FOPNLQ96NB1 174 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 STOX2Q9P2F5 926 aaPredicted RBP9.2□□□□□ -0.94
SF3B1-211ENST00000487698 GIMAP2Q9UG22 337 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 G3BP2Q9UN86 482 aaKnown RBP9.2□□□□□ -0.94
SF3B1-211ENST00000487698 ANGPTL3Q9Y5C1 460 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 PRR19A6NJB7 356 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 GYG2O15488 501 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 WDR47O94967 919 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 CEACAM5P06731 702 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 HGFP14210 728 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 LBPP18428 481 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 IMPA1P29218 277 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 MNAT1P51948 309 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 PRKCQQ04759 706 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 DMPKQ09013 629 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 GRB7Q14451 532 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 METRNLQ641Q3 311 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 UNC5DQ6UXZ4 953 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 SYT13Q7L8C5 426 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 SYNPOQ8N3V7 929 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 OR2T34Q8NGX1 318 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 RP9Q8TA86 221 aaKnown RBP9.19□□□□□ -0.94
SF3B1-211ENST00000487698 ATL1Q8WXF7 558 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 ATP6V1E2Q96A05 226 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 PYCR2Q96C36 320 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 TUBGCP3Q96CW5 907 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 RAB3IPQ96QF0 476 aaPredicted RBP9.19□□□□□ -0.94
SF3B1-211ENST00000487698 PKP4Q99569 1192 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 APOOQ9BUR5 198 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 SLC29A3Q9BZD2 475 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 ZDHHC5Q9C0B5 715 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 RMI1Q9H9A7 625 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 FZD3Q9NPG1 666 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 PFDN4Q9NQP4 134 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 ITM2CQ9NQX7 267 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 TM7SF3Q9NS93 570 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 DNAJC11Q9NVH1 559 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.19□□□□□ -0.941e-9■■□□□ 13.3
SF3B1-211ENST00000487698 EBF1Q9UH73 591 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 PCM1Q15154 2024 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 KCNE1BA0A087WTH5 132 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 MEI4A8MW99 385 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 SLC31A1O15431 190 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 GSC2O15499 205 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 LATO43561 262 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 PRAMEF4O60810 478 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 SLC16A8O95907 504 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 HOXC4P09017 264 aaPredicted RBP9.19□□□□□ -0.94
SF3B1-211ENST00000487698 THRAP10827 490 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 ARL1P40616 181 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms