RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 PRAMEF33A0A0G2JMD5 474 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 TLDC2A0PJX2 215 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 TRIM49D1C9J1S8 452 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 CTIFO43310 598 aaKnown RBP11.08□□□□□ -0.64
NUP50-216ENST00000486184 CDH16O75309 829 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 UBXN7O94888 489 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 MATN4O95460 622 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 SHBGP04278 402 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 PROS1P07225 676 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 NUDT17P0C025 328 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 CCDC166P0CW27 439 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 SHMT2P34897 504 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 SLCO1A2P46721 670 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 PGGT1BP53609 377 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 CCL7P80098 99 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 TIAL1Q01085 375 aaKnown RBP eCLIP11.08□□□□□ -0.64
NUP50-216ENST00000486184 PRKAA1Q13131 559 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 SP140Q13342 867 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 NR1D2Q14995 579 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 ZKSCAN8Q15776 578 aaPredicted RBP11.08□□□□□ -0.64
NUP50-216ENST00000486184 PPM1JQ5JR12 505 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 FRA10AC1Q70Z53 315 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 UBE2R2Q712K3 238 aaPredicted RBP11.08□□□□□ -0.64
NUP50-216ENST00000486184 OOSP2Q86WS3 158 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 OR52E1Q8NGJ3 308 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 MCOLN3Q8TDD5 553 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 EPS8L3Q8TE67 593 aaKnown RBP11.08□□□□□ -0.64
NUP50-216ENST00000486184 JPH3Q8WXH2 748 aaPredicted RBP11.08□□□□□ -0.64
NUP50-216ENST00000486184 DPYSL5Q9BPU6 564 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 TBC1D10AQ9BXI6 508 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 VPS11Q9H270 941 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 LRRN3Q9H3W5 708 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 CTNNAL1Q9UBT7 734 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 LNPEPQ9UIQ6 1025 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 PLAAQ9Y263 795 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 ACOT9Q9Y305 439 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 ASXL3Q9C0F0 2248 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 PCM1Q15154 2024 aa11.08□□□□□ -0.64
NUP50-216ENST00000486184 PTPRBP23467 1997 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 IGHV1OR21-1A0A087WYE8 117 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 A0A096LPK6 155 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 FAM221BA6H8Z2 402 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 ZNF839A8K0R7 811 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 BTN3A1O00481 513 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 RASGRF2O14827 1237 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 SLC16A5O15375 505 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 OPA1O60313 960 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 PSIP1O75475 530 aaKnown RBP11.07□□□□□ -0.64
NUP50-216ENST00000486184 C1orf105O95561 183 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 CPNE6O95741 557 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 MPOP05164 745 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 TYRP1P17643 537 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 KRT15P19012 456 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 ATP6V0D1P61421 351 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 CSHL1Q14406 222 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 KLC3Q6P597 504 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 DHRS13Q6UX07 377 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 RBM44Q6ZP01 1051 aaKnown RBP11.07□□□□□ -0.64
NUP50-216ENST00000486184 AMIGO1Q86WK6 493 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 RIBC1Q8N443 379 aaPredicted RBP11.07□□□□□ -0.64
NUP50-216ENST00000486184 OR4E2Q8NGC2 313 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 OR2W6PQ8NHA6 318 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 ASB11Q8WXH4 323 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 NCSTNQ92542 709 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 PDLIM5Q96HC4 596 aaKnown RBP11.07□□□□□ -0.64
NUP50-216ENST00000486184 CABS1Q96KC9 395 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 RUFY1Q96T51 708 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 DHRS4Q9BTZ2 278 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 DERL2Q9GZP9 239 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 TFB2MQ9H5Q4 396 aaKnown RBP11.07□□□□□ -0.64
NUP50-216ENST00000486184 TOR4AQ9NXH8 423 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 PLAGL1Q9UM63 463 aa11.07□□□□□ -0.64
NUP50-216ENST00000486184 GSAPA4D1B5 854 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 OR6C74A6NCV1 312 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 NPEPPSL1A6NEC2 478 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 ARHGEF33A8MVX0 844 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 MATN2O00339 956 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 B4GAT1O43505 415 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 TCEA3O75764 348 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 TSPAN12O95859 305 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 MT-ND3P03897 115 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 ALDOAP04075 364 aaKnown RBP11.06□□□□□ -0.64
NUP50-216ENST00000486184 S100BP04271 92 aaPredicted RBP11.06□□□□□ -0.64
NUP50-216ENST00000486184 C2P06681 752 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 ENO2P09104 434 aaPredicted RBP11.06□□□□□ -0.64
NUP50-216ENST00000486184 LTA4HP09960 611 aaKnown RBP11.06□□□□□ -0.64
NUP50-216ENST00000486184 SLC35E2BP0CK96 405 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 GCAP28676 217 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 SLC26A3P40879 764 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 CAPZBP47756 277 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 RAB28P51157 221 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 KPNA2P52292 529 aaKnown RBP11.06□□□□□ -0.64
NUP50-216ENST00000486184 CLPPQ16740 277 aaPredicted RBP11.06□□□□□ -0.64
NUP50-216ENST00000486184 FAM83EQ2M2I3 478 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 NKAIN2Q5VXU1 208 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 IRGCQ6NXR0 463 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 TMEM207Q6UWW9 146 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 CYHR1Q6ZMK1 362 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 DGLUCYQ7Z3D6 616 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 CROCCP2Q86T23 111 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms