RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 FAM187AA6NFU0 413 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 K7ENP7 123 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 SPAG6O75602 509 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 KIAA0754O94854 1291 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 S1PR4O95977 384 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 CHRM5P08912 532 aaPredicted RBP12.13□□□□□ -0.47
PTCD1-205ENST00000485746 CCNYL3P0C7X3 344 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 ERVK-10P10266 1014 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 SLC1A2P43004 574 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 MRPS25P82663 173 aaKnown RBP12.13□□□□□ -0.47
PTCD1-205ENST00000485746 C2orf54Q08AI8 447 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 SRSF6Q13247 344 aaKnown RBP12.13□□□□□ -0.47
PTCD1-205ENST00000485746 CRYMQ14894 314 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 HIF1AQ16665 826 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 TTLL9Q3SXZ7 439 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 TAF1BQ53T94 588 aaPredicted RBP12.13□□□□□ -0.47
PTCD1-205ENST00000485746 INO80CQ6PI98 192 aaPredicted RBP12.13□□□□□ -0.47
PTCD1-205ENST00000485746 C6orf15Q6UXA7 325 aaPredicted RBP12.13□□□□□ -0.47
PTCD1-205ENST00000485746 UNC5DQ6UXZ4 953 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 CENPUQ71F23 418 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 BPHLQ86WA6 291 aaPredicted RBP12.13□□□□□ -0.47
PTCD1-205ENST00000485746 DCUN1D3Q8IWE4 304 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 ADGRF3Q8IZF5 1079 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 CARFQ8N187 725 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 C2orf73Q8N5S3 287 aaPredicted RBP12.13□□□□□ -0.47
PTCD1-205ENST00000485746 ZBTB2Q8N680 514 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 SPATA4Q8NEY3 305 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 ZNF592Q92610 1267 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 NKD1Q969G9 470 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 PPM1MQ96MI6 270 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 BIRC8Q96P09 236 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 SLC7A5P2Q9GIP4 190 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 FGF21Q9NSA1 209 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 OR6C2Q9NZP2 312 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.13□□□□□ -0.47
PTCD1-205ENST00000485746 SEMA5BQ9P283 1151 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 ZC3H7BQ9UGR2 993 aaKnown RBP12.13□□□□□ -0.47
PTCD1-205ENST00000485746 CIDEBQ9UHD4 219 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 FBXO5Q9UKT4 447 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 CHMP2BQ9UQN3 213 aa12.13□□□□□ -0.47
PTCD1-205ENST00000485746 TEX51A0A1B0GUA7 166 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.12□□□□□ -0.47
PTCD1-205ENST00000485746 F7P08709 466 aaPredicted RBP12.12□□□□□ -0.47
PTCD1-205ENST00000485746 FGF5P12034 268 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 IVDP26440 423 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 CCNFP41002 786 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 ELK3P41970 407 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 CARSP49589 748 aaKnown RBP12.12□□□□□ -0.47
PTCD1-205ENST00000485746 ADARP55265 1226 aaKnown RBP12.12□□□□□ -0.47
PTCD1-205ENST00000485746 TUBB4BP68371 445 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 CKAP4Q07065 602 aaKnown RBP12.12□□□□□ -0.47
PTCD1-205ENST00000485746 CALCOCO2Q13137 446 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 TUBB2AQ13885 445 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 GPR19Q15760 415 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 KYNUQ16719 465 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 MSS51Q4VC12 460 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 ZNF789Q5FWF6 425 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 HIBCHQ6NVY1 386 aaPredicted RBP12.12□□□□□ -0.47
PTCD1-205ENST00000485746 CNSTQ6PJW8 725 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 SPESP1Q6UW49 350 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 TAX1BP1Q86VP1 789 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 DTX1Q86Y01 620 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 TMEM126BQ8IUX1 230 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 ANKMY2Q8IV38 441 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 AGGF1Q8N302 714 aaeCLIP12.12□□□□□ -0.47
PTCD1-205ENST00000485746 D2HGDHQ8N465 521 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 ESX1Q8N693 406 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 GALNT6Q8NCL4 622 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 RAD51AP1Q96B01 352 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 LRRC39Q96DD0 335 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 TRIM44Q96DX7 344 aaPredicted RBP12.12□□□□□ -0.47
PTCD1-205ENST00000485746 C16orf45Q96MC5 204 aaPredicted RBP12.12□□□□□ -0.47
PTCD1-205ENST00000485746 PWWP2AQ96N64 755 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 UBL7Q96S82 380 aaPredicted RBP12.12□□□□□ -0.47
PTCD1-205ENST00000485746 EFHD1Q9BUP0 239 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 TUBB2BQ9BVA1 445 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 RAB11FIP5Q9BXF6 653 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 DPH5Q9H2P9 285 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 GPN2Q9H9Y4 310 aaPredicted RBP12.12□□□□□ -0.47
PTCD1-205ENST00000485746 IRAK4Q9NWZ3 460 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 PILRAQ9UKJ1 303 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 CDYLQ9Y232 598 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 UTP11Q9Y3A2 253 aaKnown RBP12.12□□□□□ -0.47
PTCD1-205ENST00000485746 TMEM184BQ9Y519 407 aaPredicted RBP12.12□□□□□ -0.47
PTCD1-205ENST00000485746 COMMD10Q9Y6G5 202 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 BPTFQ12830 3046 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 IGF2RP11717 2491 aa12.12□□□□□ -0.47
PTCD1-205ENST00000485746 FANCGO15287 622 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 EFSO43281 561 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 VPS26AO75436 327 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 URI1O94763 535 aaPredicted RBP12.11□□□□□ -0.47
PTCD1-205ENST00000485746 HAUS5O94927 633 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 SEC31AO94979 1220 aaKnown RBP12.11□□□□□ -0.47
PTCD1-205ENST00000485746 MT-ND3P03897 115 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 PVRP15151 417 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 ST6GAL1P15907 406 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 UGT2B7P16662 529 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 ZNF28P17035 718 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 PKLRP30613 574 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 BDKRB1P46663 353 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms