RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 ESAMQ96AP7 390 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 LRRC58Q96CX6 371 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 POLE4Q9NR33 117 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 TBCCD1Q9NVR7 557 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 ZNF639Q9UID6 485 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 NOCTQ9UK39 431 aaKnown RBP9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 RAI2Q9Y5P3 530 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 FXYD6-FXYD2A0A087WZ82 144 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 FZD9O00144 591 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 FFAR2O15552 330 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 C8BP07358 591 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 LINGO3P0C6S8 592 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 HDCP19113 662 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 CSTF2P33240 577 aaKnown RBP eCLIP9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 CASP9P55211 416 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 IKBKEQ14164 716 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 TEAD4Q15561 434 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 PABPC1LQ4VXU2 614 aaKnown RBP9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 TSTD2Q5T7W7 516 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 HMBOX1Q6NT76 420 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 ZNF782Q6ZMW2 699 aaPredicted RBP9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 TOMM5Q8N4H5 51 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 BSNDQ8WZ55 320 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 TMEM203Q969S6 136 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 OR52B2Q96RD2 323 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 SLC39A3Q9BRY0 314 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 NUSAP1Q9BXS6 441 aaKnown RBP9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 TRIM2Q9C040 744 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 FXYD6Q9H0Q3 95 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 TCF7L1Q9HCS4 588 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 ZNF358Q9NW07 568 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 LRRC42Q9Y546 428 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 AHDC1Q5TGY3 1603 aaPredicted RBP9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 SH3D21A4FU49 640 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 MT-CYBP00156 380 aaPredicted RBP9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 IL7RP16871 459 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 ENTPD1P49961 510 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 ADAM8P78325 824 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 LAPTM5Q13571 262 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 RAB12Q6IQ22 244 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 GPALPP1Q8IXQ4 340 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 CMAHPQ9Y471 501 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 ALG5Q9Y673 324 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 A0A0G2JLL6 359 aaPredicted RBP9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 TCRBV7S3A2A0A539 114 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 TBC1D3BA6NDS4 549 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 TMEM63AO94886 807 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 MMP3P08254 477 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 F7P08709 466 aaPredicted RBP9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 ELFN1P0C7U0 828 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 LAMP2P13473 410 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 ELNP15502 786 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 GNALP38405 381 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 HADHBP55084 474 aaKnown RBP9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 TSPAN5P62079 268 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 ZNF155Q12901 538 aaPredicted RBP9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 NAE1Q13564 534 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 HSDL1Q3SXM5 330 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 PARP15Q460N3 678 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 MED27Q6P2C8 311 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 DRICH1Q6PGQ1 229 aaPredicted RBP9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 PRRT2Q7Z6L0 340 aaPredicted RBP9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 METTL3Q86U44 580 aaKnown RBP9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 CPNE8Q86YQ8 564 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 KLHL36Q8N4N3 616 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 LRRC52Q8N7C0 313 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 ZNF557Q8N988 423 aaPredicted RBP9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 AKAP1Q92667 903 aaKnown RBP eCLIP9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 ISOC1Q96CN7 298 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 ZNF350Q9GZX5 532 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 ARHGEF4Q9NR80 690 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 SNX10Q9Y5X0 201 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 DAPL1A0PJW8 107 aa9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 ERN1O75460 977 aaKnown RBP9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 CLUP10909 449 aa9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 GLDCP23378 1020 aa9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 STOMP27105 288 aa9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 RPS14P62263 151 aaKnown RBP9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 RPA4Q13156 261 aa9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 ZNF267Q14586 743 aaPredicted RBP9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 TMEM236Q5W0B7 351 aa9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 HDAC2Q92769 488 aaKnown RBP9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 UPF1Q92900 1129 aaKnown RBP eCLIP9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 AIFM2Q9BRQ8 373 aa9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 DPAGT1Q9H3H5 408 aa9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 OXSMQ9NWU1 459 aa9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 PCDHGB3Q9Y5G1 929 aa9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 LRP6O75581 1613 aa9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 AKAP8O43823 692 aaKnown RBP9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 DNAJA1P31689 397 aaKnown RBP9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 EEFSECP57772 596 aaKnown RBP9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 PPP3R1P63098 170 aa9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 QSOX2Q6ZRP7 698 aa9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 INO80EQ8NBZ0 244 aaPredicted RBP9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 TRIM43Q96BQ3 446 aaPredicted RBP9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 RDH8Q9NYR8 311 aa9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 COL20A1Q9P218 1284 aa9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 PHF24Q9UPV7 400 aa9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 CNTNAP1P78357 1384 aa9.38□□□□□ -0.91
CDK5RAP2-216ENST00000483412 KERAO60938 352 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms