RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 DCDC1P59894 354 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 IL2P60568 153 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 DNASE1L3Q13609 305 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 PDK2Q15119 407 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 ZFYVE27Q5T4F4 411 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 CCDC183Q5T5S1 534 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 FHL5Q5TD97 284 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 CACHD1Q5VU97 1274 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 ALS2CLQ60I27 953 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 NCBP2-AS2Q69YL0 99 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 PDPK2PQ6A1A2 396 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 KLHL35Q6PF15 583 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 CLEC18BQ6UXF7 455 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 CLEC17AQ6ZS10 378 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 PRSS42Q7Z5A4 293 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 LRRTM4Q86VH4 590 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 PPP1R3BQ86XI6 285 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 KCTD6Q8NC69 237 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 CLEC18CQ8NCF0 446 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 CCNYQ8ND76 341 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 ARRDC2Q8TBH0 407 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 GLYATL1Q969I3 302 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 CXorf40BQ96DE9 158 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 ZDHHC12Q96GR4 267 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 ELMO2Q96JJ3 720 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 ZNF830Q96NB3 372 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-207ENST00000483407 GBP4Q96PP9 640 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 PLEKHG4BQ96PX9 1271 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 WDR24Q96S15 920 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 ZNF670Q9BS34 389 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 TIMM29Q9BSF4 260 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 ZSCAN5AQ9BUG6 496 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 NUP85Q9BW27 656 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 TRIM8Q9BZR9 551 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 TWSG1Q9GZX9 223 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 THAP2Q9H0W7 228 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 OR2AG1Q9H205 316 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 HSD3B7Q9H2F3 369 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 ZNF768Q9H5H4 540 aaKnown RBP5.76□□□□□ -1.49
CSDE1-207ENST00000483407 PDE7BQ9NP56 450 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 ZFP64Q9NPA5 681 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 CATSPERZQ9NTU4 200 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 PADI1Q9ULC6 663 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 VPS4AQ9UN37 437 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 DNAJC16Q9Y2G8 782 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 PCDHGA6Q9Y5G7 932 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 PCYT1BQ9Y5K3 369 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-207ENST00000483407 BZW2Q9Y6E2 419 aaKnown RBP5.76□□□□□ -1.49
CSDE1-207ENST00000483407 X6R8D5 127 aa5.76□□□□□ -1.49
CSDE1-207ENST00000483407 SCO2A0A1W2PP80 73 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 GOLGA6L3A6NEY3 463 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 CHUKO15111 745 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 VEGFDO43915 354 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 SPAG6O75602 509 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 CDK14O94921 469 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 AGFG2O95081 481 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 SERPINC1P01008 464 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 TGFB1P01137 390 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 SLC4A1P02730 911 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 KRT7P08729 469 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 CD48P09326 243 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 FGF5P12034 268 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 ZNF7P17097 686 aaPredicted RBP5.75□□□□□ -1.49
CSDE1-207ENST00000483407 NR1D1P20393 614 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 IDSP22304 550 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 GJC1P36383 396 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 HALP42357 657 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 CAPZBP47756 277 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 LEPRP48357 1165 aaKnown RBP5.75□□□□□ -1.49
CSDE1-207ENST00000483407 CORO7P57737 925 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 RPS15P62841 145 aaKnown RBP5.75□□□□□ -1.49
CSDE1-207ENST00000483407 PDE1BQ01064 536 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 OCRLQ01968 901 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 ACY1Q03154 408 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 NIPAL4Q0D2K0 466 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 GTF2H3Q13889 308 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 DPYSL3Q14195 570 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 IHHQ14623 411 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 FIGNQ5HY92 759 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 CCDC70Q6NSX1 233 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 IRGCQ6NXR0 463 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 ABRAXAS1Q6UWZ7 409 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 WASH2PQ6VEQ5 465 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 ADGRG6Q86SQ4 1221 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 APLFQ8IW19 511 aaPredicted RBP5.75□□□□□ -1.49
CSDE1-207ENST00000483407 TRAM1L1Q8N609 369 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 SIDT2Q8NBJ9 832 aaKnown RBP5.75□□□□□ -1.49
CSDE1-207ENST00000483407 FAM71BQ8TC56 605 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 THAP4Q8WY91 577 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 HDAC11Q96DB2 347 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 TTC25Q96NG3 672 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 FCRL4Q96PJ5 515 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 JMJD8Q96S16 334 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 JAM3Q9BX67 310 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 GPR63Q9BZJ6 419 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 MAGEE1Q9HCI5 957 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 ARFGAP3Q9NP61 516 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 EMC7Q9NPA0 242 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 LHX9Q9NQ69 397 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 WASH6PQ9NQA3 447 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms