RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 MAP7D2Q96T17 732 aa2.79□□□□□ -1.96
LAPTM4A-202ENST00000483117 VGLL1Q99990 258 aa2.79□□□□□ -1.96
LAPTM4A-202ENST00000483117 THUMPD3Q9BV44 507 aaKnown RBP2.79□□□□□ -1.96
LAPTM4A-202ENST00000483117 ZDHHC18Q9NUE0 388 aa2.79□□□□□ -1.96
LAPTM4A-202ENST00000483117 PTTG2Q9NZH5 202 aa2.79□□□□□ -1.96
LAPTM4A-202ENST00000483117 SUCLA2Q9P2R7 463 aaPredicted RBP2.79□□□□□ -1.96
LAPTM4A-202ENST00000483117 CACNG4Q9UBN1 327 aa2.79□□□□□ -1.96
LAPTM4A-202ENST00000483117 HOOK1Q9UJC3 728 aaKnown RBP2.79□□□□□ -1.96
LAPTM4A-202ENST00000483117 INTS6Q9UL03 887 aaKnown RBP2.79□□□□□ -1.96
LAPTM4A-202ENST00000483117 MKLN1Q9UL63 735 aa2.79□□□□□ -1.96
LAPTM4A-202ENST00000483117 KCNJ14Q9UNX9 436 aa2.79□□□□□ -1.96
LAPTM4A-202ENST00000483117 PYGO1Q9Y3Y4 419 aa2.79□□□□□ -1.96
LAPTM4A-202ENST00000483117 CAPN7Q9Y6W3 813 aa2.79□□□□□ -1.96
LAPTM4A-202ENST00000483117 STK36Q9NRP7 1315 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 H7C423 109 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 MPHOSPH10O00566 681 aaKnown RBP2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 SLC22A2O15244 555 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 ZBTB14O43829 449 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 SEC22BO75396 215 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 NKX2-2O95096 273 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 IGHV4-38-2P0DP08 117 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 MAPK3P27361 379 aaPredicted RBP2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 ARF5P84085 180 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 SCN1BQ07699 218 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 TUBB2AQ13885 445 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 CRY2Q49AN0 593 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 CDONQ4KMG0 1287 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 LCN10Q6JVE6 187 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 KLHL35Q6PF15 583 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 TSSK4Q6SA08 328 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 ZNF440Q8IYI8 595 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 WDTC1Q8N5D0 677 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 POC5Q8NA72 575 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 TMEM116Q8NCL8 245 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 RDM1Q8NG50 284 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 PSMA8Q8TAA3 256 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 PSPC1Q8WXF1 523 aaKnown RBP2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 ZNF622Q969S3 477 aaKnown RBP eCLIP2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 VPS33AQ96AX1 596 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 SIPA1Q96FS4 1042 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 HARBI1Q96MB7 349 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 CFAP57Q96MR6 1250 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 CMTM3Q96MX0 182 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 WDFY2Q96P53 400 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 TSGA13Q96PP4 275 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 SLX1AQ9BQ83 275 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 ANP32EQ9BTT0 268 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 TUBB2BQ9BVA1 445 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 ACAT2Q9BWD1 397 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 FUT8Q9BYC5 575 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 SIX2Q9NPC8 291 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 RPS10P5Q9NQ39 176 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 SLC38A7Q9NVC3 462 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 DCAF16Q9NXF7 216 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 TRMT1Q9NXH9 659 aaKnown RBP2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 ABI3Q9P2A4 366 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 TMEM181Q9P2C4 612 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 COPG2Q9UBF2 871 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 DNAJB4Q9UDY4 337 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 STK39Q9UEW8 545 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 LEF1Q9UJU2 399 aaPredicted RBP2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 PPIEQ9UNP9 301 aaKnown RBP2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 MTMR6Q9Y217 621 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 LIPT1Q9Y234 373 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 KIF3AQ9Y496 699 aa2.78□□□□□ -1.96
LAPTM4A-202ENST00000483117 SPAG9O60271 1321 aaKnown RBP2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 A0A0U1RQK1 487 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 TCRBV21S2A2A0A5A6 115 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 ZNF320A2RRD8 509 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 MAGEB17A8MXT2 336 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 CDRT15L2A8MXV6 281 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 ANKRD66B4E2M5 251 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 H0YIN7 160 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 IPO8O15397 1037 aaKnown RBP2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 ADAM20O43506 726 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 PAGE4O60829 102 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 NOL3O60936 208 aaKnown RBP2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 ENTPD3O75355 529 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 GJB3O75712 270 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 FYNP06241 537 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 LIPFP07098 398 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 ABCB1P08183 1280 aaPredicted RBP2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 AZU1P20160 251 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 PTAFRP25105 342 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 CD86P42081 329 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 LIG4P49917 911 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 CSRP3P50461 194 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 MRPL12P52815 198 aaKnown RBP2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 CSE1LP55060 971 aaKnown RBP2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 HMGN5P82970 282 aaKnown RBP2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 IL1RL1Q01638 556 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 LRRC74AQ0VAA2 488 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 OLIG2Q13516 323 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 BAATQ14032 418 aaPredicted RBP2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 ZNF674Q2M3X9 581 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 TYSND1Q2T9J0 566 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 CST9LP1Q5W188 147 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 NSUN5P2Q63ZY6 315 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms