RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 SSMEM1Q8WWF3 244 aa5.29□□□□□ -1.56
SF3B1-210ENST00000482158 DHX58Q96C10 678 aa5.29□□□□□ -1.56
SF3B1-210ENST00000482158 SLC47A1Q96FL8 570 aa5.29□□□□□ -1.56
SF3B1-210ENST00000482158 FEVQ99581 238 aa5.29□□□□□ -1.56
SF3B1-210ENST00000482158 CPNE1Q99829 537 aa5.29□□□□□ -1.56
SF3B1-210ENST00000482158 EDEM3Q9BZQ6 932 aa5.29□□□□□ -1.56
SF3B1-210ENST00000482158 ZBTB20Q9HC78 741 aaPredicted RBP5.29□□□□□ -1.56
SF3B1-210ENST00000482158 ACAD8Q9UKU7 415 aa5.29□□□□□ -1.56
SF3B1-210ENST00000482158 A0A1W2PRB8 838 aa5.28□□□□□ -1.56
SF3B1-210ENST00000482158 OR6C76A6NM76 312 aa5.28□□□□□ -1.56
SF3B1-210ENST00000482158 CRYAAP02489 173 aa5.28□□□□□ -1.56
SF3B1-210ENST00000482158 ERCC2P18074 760 aa5.28□□□□□ -1.56
SF3B1-210ENST00000482158 CD22P20273 847 aa5.28□□□□□ -1.56
SF3B1-210ENST00000482158 AZGP1P25311 298 aaKnown RBP5.28□□□□□ -1.56
SF3B1-210ENST00000482158 SLC6A6P31641 620 aa5.28□□□□□ -1.56
SF3B1-210ENST00000482158 NR2C2P49116 596 aa5.28□□□□□ -1.56
SF3B1-210ENST00000482158 MAPK12P53778 367 aa5.28□□□□□ -1.56
SF3B1-210ENST00000482158 RPS18P62269 152 aaKnown RBP5.28□□□□□ -1.56
SF3B1-210ENST00000482158 TFCP2Q12800 502 aa5.28□□□□□ -1.56
SF3B1-210ENST00000482158 DMP1Q13316 513 aaPredicted RBP5.28□□□□□ -1.56
SF3B1-210ENST00000482158 RBBP5Q15291 538 aaKnown RBP5.28□□□□□ -1.56
SF3B1-210ENST00000482158 PHLDA2Q53GA4 152 aa5.28□□□□□ -1.56
SF3B1-210ENST00000482158 TRAT1Q6PIZ9 186 aa5.28□□□□□ -1.56
SF3B1-210ENST00000482158 C18orf65Q6ZTR6 163 aa5.28□□□□□ -1.56
SF3B1-210ENST00000482158 ROBO4Q8WZ75 1007 aa5.28□□□□□ -1.56
SF3B1-210ENST00000482158 IRGQQ8WZA9 623 aa5.28□□□□□ -1.56
SF3B1-210ENST00000482158 HSD17B8Q92506 261 aa5.28□□□□□ -1.56
SF3B1-210ENST00000482158 ZNF558Q96NG5 402 aa5.28□□□□□ -1.56
SF3B1-210ENST00000482158 MYADMQ96S97 322 aa5.28□□□□□ -1.56
SF3B1-210ENST00000482158 TRAF4Q9BUZ4 470 aaPredicted RBP5.28□□□□□ -1.56
SF3B1-210ENST00000482158 A4GALTQ9NPC4 353 aa5.28□□□□□ -1.56
SF3B1-210ENST00000482158 CHCHD3Q9NX63 227 aaKnown RBP5.28□□□□□ -1.56
SF3B1-210ENST00000482158 PROCRQ9UNN8 238 aa5.28□□□□□ -1.56
SF3B1-210ENST00000482158 JRKLQ9Y4A0 524 aa5.28□□□□□ -1.56
SF3B1-210ENST00000482158 P2RY10O00398 339 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 SLC22A2O15244 555 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 RNASEH1O60930 286 aaKnown RBP5.27□□□□□ -1.57
SF3B1-210ENST00000482158 TSHBP01222 138 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 ATP1A1P05023 1023 aaKnown RBP5.27□□□□□ -1.57
SF3B1-210ENST00000482158 FGF5P12034 268 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 PAX1P15863 534 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 IFNAR1P17181 557 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 EPHA2P29317 976 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 LHX1P48742 406 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 ACCSLQ4AC99 568 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 TECRLQ5HYJ1 363 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 SPDYCQ5MJ68 293 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 CCNYL2Q5T2Q4 361 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 KRT39Q6A163 491 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 MFSD12Q6NUT3 480 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 C19orf48Q6RUI8 117 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 GDPD4Q6W3E5 623 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 FAM47EQ6ZV65 393 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 ERN2Q76MJ5 926 aaKnown RBP5.27□□□□□ -1.57
SF3B1-210ENST00000482158 DET1Q7L5Y6 550 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 NUP54Q7Z3B4 507 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 ZNF843Q8N446 348 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 TTC30BQ8N4P2 665 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 PPFIBP2Q8ND30 876 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 FCAMRQ8WWV6 532 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 SYN2Q92777 582 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-210ENST00000482158 SPSB1Q96BD6 273 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 OTUB1Q96FW1 271 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-210ENST00000482158 PSD2Q9BQI7 771 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 RTP3Q9BQQ7 232 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 MMP28Q9H239 520 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 FZD8Q9H461 694 aa5.27□□□□□ -1.57
SF3B1-210ENST00000482158 UPF2Q9HAU5 1272 aaKnown RBP5.27□□□□□ -1.57
SF3B1-210ENST00000482158 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-210ENST00000482158 FLT1P17948 1338 aa5.26□□□□□ -1.57
SF3B1-210ENST00000482158 A0A1W2PPK0 400 aa5.26□□□□□ -1.57
SF3B1-210ENST00000482158 EME2A4GXA9 379 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-210ENST00000482158 CCDC188H7C350 402 aa5.26□□□□□ -1.57
SF3B1-210ENST00000482158 PENKP01210 267 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-210ENST00000482158 NPY4RP50391 375 aa5.26□□□□□ -1.57
SF3B1-210ENST00000482158 ASCL1P50553 236 aa5.26□□□□□ -1.57
SF3B1-210ENST00000482158 ROR1Q01973 937 aa5.26□□□□□ -1.57
SF3B1-210ENST00000482158 CA9Q16790 459 aa5.26□□□□□ -1.57
SF3B1-210ENST00000482158 WDR38Q5JTN6 314 aa5.26□□□□□ -1.57
SF3B1-210ENST00000482158 TMEM139Q8IV31 216 aa5.26□□□□□ -1.57
SF3B1-210ENST00000482158 CFAP206Q8IYR0 622 aa5.26□□□□□ -1.57
SF3B1-210ENST00000482158 BMPERQ8N8U9 685 aa5.26□□□□□ -1.57
SF3B1-210ENST00000482158 EXT2Q93063 718 aa5.26□□□□□ -1.57
SF3B1-210ENST00000482158 SIPA1Q96FS4 1042 aa5.26□□□□□ -1.57
SF3B1-210ENST00000482158 S1PR5Q9H228 398 aa5.26□□□□□ -1.57
SF3B1-210ENST00000482158 SH3GLB2Q9NR46 395 aa5.26□□□□□ -1.57
SF3B1-210ENST00000482158 ANAPC5Q9UJX4 755 aa5.26□□□□□ -1.57
SF3B1-210ENST00000482158 IFITM10A6NMD0 228 aa5.25□□□□□ -1.57
SF3B1-210ENST00000482158 CLDN4O14493 209 aa5.25□□□□□ -1.57
SF3B1-210ENST00000482158 ACSL3O95573 720 aa5.25□□□□□ -1.57
SF3B1-210ENST00000482158 IGLV2-11P01706 119 aa5.25□□□□□ -1.57
SF3B1-210ENST00000482158 NR3C1P04150 777 aa5.25□□□□□ -1.57
SF3B1-210ENST00000482158 CSN3P07498 182 aa5.25□□□□□ -1.57
SF3B1-210ENST00000482158 IGHV4-38-2P0DP08 117 aa5.25□□□□□ -1.57
SF3B1-210ENST00000482158 HAPLN1P10915 354 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-210ENST00000482158 HSPA8P11142 646 aaKnown RBP5.25□□□□□ -1.57
SF3B1-210ENST00000482158 HOXC8P31273 242 aa5.25□□□□□ -1.57
SF3B1-210ENST00000482158 PTGER4P35408 488 aa5.25□□□□□ -1.57
SF3B1-210ENST00000482158 LGALS3BPQ08380 585 aa5.25□□□□□ -1.57
SF3B1-210ENST00000482158 ZNF415Q09FC8 603 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms