RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ERI2A8K979 691 aaKnown RBP14.74□□□□□ -0.05
LIMS3-203ENST00000480744 OR1I1O60431 355 aa14.74□□□□□ -0.05
LIMS3-203ENST00000480744 CHRM5P08912 532 aaPredicted RBP14.74□□□□□ -0.05
LIMS3-203ENST00000480744 HBQ1P09105 142 aa14.74□□□□□ -0.05
LIMS3-203ENST00000480744 MSL3P1P0C860 447 aa14.74□□□□□ -0.05
LIMS3-203ENST00000480744 AGXTP21549 392 aa14.74□□□□□ -0.05
LIMS3-203ENST00000480744 NCF4Q15080 339 aa14.74□□□□□ -0.05
LIMS3-203ENST00000480744 NADK2Q4G0N4 442 aa14.74□□□□□ -0.05
LIMS3-203ENST00000480744 AFTPHQ6ULP2 937 aa14.74□□□□□ -0.05
LIMS3-203ENST00000480744 TBC1D21Q8IYX1 336 aa14.74□□□□□ -0.05
LIMS3-203ENST00000480744 EFCAB3Q8N7B9 438 aa14.74□□□□□ -0.05
LIMS3-203ENST00000480744 OR6P1Q8NGX9 317 aa14.74□□□□□ -0.05
LIMS3-203ENST00000480744 ADAMTS17Q8TE56 1095 aa14.74□□□□□ -0.05
LIMS3-203ENST00000480744 HDAC10Q969S8 669 aa14.74□□□□□ -0.05
LIMS3-203ENST00000480744 TTC1Q99614 292 aa14.74□□□□□ -0.05
LIMS3-203ENST00000480744 FAM60AQ9NP50 221 aa14.74□□□□□ -0.05
LIMS3-203ENST00000480744 IRAK4Q9NWZ3 460 aa14.74□□□□□ -0.05
LIMS3-203ENST00000480744 SPHK1Q9NYA1 384 aa14.74□□□□□ -0.05
LIMS3-203ENST00000480744 SLC2A6Q9UGQ3 507 aa14.74□□□□□ -0.05
LIMS3-203ENST00000480744 POLG2Q9UHN1 485 aa14.74□□□□□ -0.05
LIMS3-203ENST00000480744 ZNF148Q9UQR1 794 aa14.74□□□□□ -0.05
LIMS3-203ENST00000480744 PCDHGA9Q9Y5G4 932 aaKnown RBP14.74□□□□□ -0.05
LIMS3-203ENST00000480744 LRRK2Q5S007 2527 aa14.74□□□□□ -0.05
LIMS3-203ENST00000480744 SLC5A10A0PJK1 596 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 A6NL46 340 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 ISM1B1AKI9 464 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 BHMG1C9JSJ3 638 aaPredicted RBP14.73□□□□□ -0.05
LIMS3-203ENST00000480744 ZNF185O15231 689 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 LIASO43766 372 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 OR2B3O76000 313 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 GOT2P00505 430 aaKnown RBP14.73□□□□□ -0.05
LIMS3-203ENST00000480744 CAPN1P07384 714 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 ACADLP28330 430 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 STIP1P31948 543 aaKnown RBP14.73□□□□□ -0.05
LIMS3-203ENST00000480744 OTX2P32243 289 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 FDFT1P37268 417 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 GRIA1P42261 906 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 SNX1Q13596 522 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 ATP1A4Q13733 1029 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 ZIC1Q15915 447 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 TSTD2Q5T7W7 516 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 C1orf189Q5VU69 101 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 LYPLAL1Q5VWZ2 237 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 PRUNE1Q86TP1 453 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 OR13J1Q8NGT2 312 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 OR5K2Q8NHB8 316 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 C1orf54Q8WWF1 131 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 TCTN2Q96GX1 697 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 OR2A14Q96R47 310 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 SPRTNQ9H040 489 aaPredicted RBP14.73□□□□□ -0.05
LIMS3-203ENST00000480744 GRPEL1Q9HAV7 217 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 G3BP2Q9UN86 482 aaKnown RBP14.73□□□□□ -0.05
LIMS3-203ENST00000480744 PADI2Q9Y2J8 665 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 ANKRD12Q6UB98 2062 aa14.73□□□□□ -0.05
LIMS3-203ENST00000480744 RP1L1Q8IWN7 2480 aaPredicted RBP14.72□□□□□ -0.05
LIMS3-203ENST00000480744 PCSK5Q92824 1860 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 A0A0J9YY10 115 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 F8W8V4 182 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 HCRTR1O43613 425 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 KDM1AO60341 852 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 VPS4BO75351 444 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 TPBGLP0DKB5 382 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 CBSLP0DN79 551 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 ETS1P14921 441 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 ADRA1DP25100 572 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 PSMA3P25788 255 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 CBSP35520 551 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 CD97P48960 835 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 PRAMEP78395 509 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 PLOD1Q02809 727 aaPredicted RBP14.72□□□□□ -0.05
LIMS3-203ENST00000480744 SRSF1Q07955 248 aaKnown RBP eCLIP14.72□□□□□ -0.05
LIMS3-203ENST00000480744 OASLQ15646 514 aaKnown RBP14.72□□□□□ -0.05
LIMS3-203ENST00000480744 FASTKD1Q53R41 847 aaKnown RBP14.72□□□□□ -0.05
LIMS3-203ENST00000480744 MLIPQ5VWP3 458 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 RAB43Q86YS6 212 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 FAM26EQ8N5C1 309 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 ZBTB2Q8N680 514 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 OR4L1Q8NH43 312 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 CPT1CQ8TCG5 803 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 DPH2Q9BQC3 489 aaPredicted RBP14.72□□□□□ -0.05
LIMS3-203ENST00000480744 RAB6BQ9NRW1 208 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 OR6C2Q9NZP2 312 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 LUZP4Q9P127 313 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 CIDEBQ9UHD4 219 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 GPN3Q9UHW5 284 aaPredicted RBP14.72□□□□□ -0.05
LIMS3-203ENST00000480744 GUCA1BQ9UMX6 200 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 VPS4AQ9UN37 437 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 ZNF451Q9Y4E5 1061 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 AP1M2Q9Y6Q5 423 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 RELNP78509 3460 aa14.72□□□□□ -0.05
LIMS3-203ENST00000480744 SHANK1Q9Y566 2161 aa14.71□□□□□ -0.05
LIMS3-203ENST00000480744 SPENQ96T58 3664 aaKnown RBP14.71□□□□□ -0.05
LIMS3-203ENST00000480744 SUN1O94901 812 aa14.71□□□□□ -0.05
LIMS3-203ENST00000480744 APRTP07741 180 aa14.71□□□□□ -0.05
LIMS3-203ENST00000480744 UQCRFS1P47985 274 aa14.71□□□□□ -0.05
LIMS3-203ENST00000480744 RRADP55042 308 aa14.71□□□□□ -0.05
LIMS3-203ENST00000480744 HSPA14Q0VDF9 509 aa14.71□□□□□ -0.05
LIMS3-203ENST00000480744 RAPSNQ13702 412 aa14.71□□□□□ -0.05
LIMS3-203ENST00000480744 SLC9A5Q14940 896 aa14.71□□□□□ -0.05
LIMS3-203ENST00000480744 KYNUQ16719 465 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms