RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 PABPN1LA6NDY0 278 aaKnown RBP6.26□□□□□ -1.41
HERC4-210ENST00000480158 LRRC14BA6NHZ5 514 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 PLIN3O60664 434 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 EPN2O95208 641 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 MATN4O95460 622 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 C1orf105O95561 183 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 PROCP04070 461 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 ANXA6P08133 673 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 HIST1H2AGP0C0S8 130 aaPredicted RBP6.26□□□□□ -1.41
HERC4-210ENST00000480158 COL6A2P12110 1019 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 CHN1P15882 459 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 HIST1H2ADP20671 130 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 ACADLP28330 430 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 GDF5P43026 501 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 AGTR2P50052 363 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 MAZP56270 477 aaKnown RBP6.26□□□□□ -1.41
HERC4-210ENST00000480158 ATP6V0D1P61421 351 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 DMPKQ09013 629 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 RPA4Q13156 261 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 BIRC2Q13490 618 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 TGFBIQ15582 683 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 TSNAXIP1Q2TAA8 658 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 TECRLQ5HYJ1 363 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 HHATQ5VTY9 493 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 PEAR1Q5VY43 1037 aaPredicted RBP6.26□□□□□ -1.41
HERC4-210ENST00000480158 LAIR1Q6GTX8 287 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 SLC23A3Q6PIS1 610 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 ZCCHC23Q6ZST2 131 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 GKN2Q86XP6 184 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 TRIM48Q8IWZ4 208 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 NAGSQ8N159 534 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 TMEM151AQ8N4L1 468 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 MINDY1Q8N5J2 469 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 DYDC1Q8WWB3 177 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 PYCR2Q96C36 320 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 HIST1H2AHQ96KK5 128 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 IL17FQ96PD4 163 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 HIST1H2AJQ99878 128 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 USB1Q9BQ65 265 aaKnown RBP6.26□□□□□ -1.41
HERC4-210ENST00000480158 MRPL57Q9BQC6 102 aaKnown RBP6.26□□□□□ -1.41
HERC4-210ENST00000480158 H2AFJQ9BTM1 129 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 ATG10Q9H0Y0 220 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 MRPL46Q9H2W6 279 aaKnown RBP6.26□□□□□ -1.41
HERC4-210ENST00000480158 DNAAF2Q9NVR5 837 aaKnown RBP6.26□□□□□ -1.41
HERC4-210ENST00000480158 MAP10Q9P2G4 905 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 ZNF624Q9P2J8 865 aaPredicted RBP6.26□□□□□ -1.41
HERC4-210ENST00000480158 NCDNQ9UBB6 729 aa6.26□□□□□ -1.41
HERC4-210ENST00000480158 ZFHX2Q9C0A1 2572 aaPredicted RBP6.26□□□□□ -1.41
HERC4-210ENST00000480158 PRPF4O43172 522 aaKnown RBP eCLIP6.25□□□□□ -1.41
HERC4-210ENST00000480158 DLX3O60479 287 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 SIX3O95343 332 aaPredicted RBP6.25□□□□□ -1.41
HERC4-210ENST00000480158 SLC16A8O95907 504 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 CATP04040 527 aaKnown RBP6.25□□□□□ -1.41
HERC4-210ENST00000480158 RETP07949 1114 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 SYPP08247 313 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 GSTA1P08263 222 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 RBP1P09455 135 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 MYL2P10916 166 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 CPA3P15088 417 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 TSPAN8P19075 237 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 HOXD12P35452 270 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 SLC26A3P40879 764 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 SLC19A1P41440 591 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 WDR4P57081 412 aaKnown RBP6.25□□□□□ -1.41
HERC4-210ENST00000480158 GUCY1A3Q02108 690 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 PLOD1Q02809 727 aaPredicted RBP6.25□□□□□ -1.41
HERC4-210ENST00000480158 PLCL1Q15111 1095 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 PPP1R3AQ16821 1122 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 CAPRIN2Q6IMN6 1127 aaKnown RBP6.25□□□□□ -1.41
HERC4-210ENST00000480158 TTC23LQ6PF05 361 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 IYDQ6PHW0 289 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 ADAMTSL2Q86TH1 951 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 C10orf107Q8IVU9 208 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 EID2Q8N6I1 236 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 CCNYL1Q8N7R7 359 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 FAM76AQ8TAV0 307 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 MCOLN3Q8TDD5 553 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 SLC37A2Q8TED4 501 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 MED8Q96G25 268 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 PDLIM5Q96HC4 596 aaKnown RBP6.25□□□□□ -1.41
HERC4-210ENST00000480158 ATOH8Q96SQ7 321 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 PKP4Q99569 1192 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 TFB2MQ9H5Q4 396 aaKnown RBP6.25□□□□□ -1.41
HERC4-210ENST00000480158 ERVMER34-1Q9H9K5 563 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 PARVBQ9HBI1 364 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 KLHL42Q9P2K6 505 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 ADAMTS9Q9P2N4 1935 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 MUC6Q6W4X9 2439 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 A0A1B0GTQ1 180 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 A6NCN8 305 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 PRR19A6NJB7 356 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 LMO7DNF2Z398 122 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 G3V2L1 256 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 GFYI3L273 518 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 CASC3O15234 703 aaKnown RBP6.25□□□□□ -1.41
HERC4-210ENST00000480158 KCNJ13O60928 360 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 KERAO60938 352 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 PSIP1O75475 530 aaKnown RBP6.25□□□□□ -1.41
HERC4-210ENST00000480158 DKK1O94907 266 aa6.25□□□□□ -1.41
HERC4-210ENST00000480158 ZWINTO95229 277 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms