RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 BRMS1LQ5PSV4 323 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 TWF2Q6IBS0 349 aaKnown RBP8.22□□□□□ -1.09
VAPB-205ENST00000476395 MRPL10Q7Z7H8 261 aaKnown RBP8.22□□□□□ -1.09
VAPB-205ENST00000476395 COLGALT2Q8IYK4 626 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 PTGR2Q8N8N7 351 aaPredicted RBP8.22□□□□□ -1.09
VAPB-205ENST00000476395 IL17RDQ8NFM7 739 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 OR13C4Q8NGS5 318 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 OR5H6Q8NGV6 325 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 DEPDC7Q96QD5 511 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 NELL2Q99435 816 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 MYOCQ99972 504 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 FBXO8Q9NRD0 319 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 FBXL12Q9NXK8 326 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 ZNF221Q9UK13 617 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 GOLGA8CPA6NN73 597 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 SLC1A7O00341 560 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 ANKRD28O15084 1053 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 RPS17P08708 135 aaKnown RBP8.22□□□□□ -1.09
VAPB-205ENST00000476395 OR4Q2P0C623 313 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 THRBP10828 461 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 GGT5P36269 586 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 HTR2BP41595 481 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 PPP5CP53041 499 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 SLC12A2P55011 1212 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 GNG2P59768 71 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 KCNAB2Q13303 367 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 KIAA0040Q15053 153 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 PTPRRQ15256 657 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 TYSND1Q2T9J0 566 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 HABP4Q5JVS0 413 aaKnown RBP8.22□□□□□ -1.09
VAPB-205ENST00000476395 DLEU7Q6UYE1 221 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 CLYBLQ8N0X4 340 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 UBE2FQ969M7 185 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 NODALQ96S42 347 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 ZNF717Q9BY31 904 aaPredicted RBP8.22□□□□□ -1.09
VAPB-205ENST00000476395 PRKD2Q9BZL6 878 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 BRINP2Q9C0B6 783 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 CLPBQ9H078 707 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 UCKL1Q9NWZ5 548 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 MAT2BQ9NZL9 334 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 SPEF1Q9Y4P9 236 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 FAM172BPA6NC97 362 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 BBIP1A8MTZ0 92 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 ZW10O43264 779 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 MITFO75030 526 aaPredicted RBP8.22□□□□□ -1.09
VAPB-205ENST00000476395 EPN2O95208 641 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 CELF2O95319 508 aaKnown RBP8.22□□□□□ -1.09
VAPB-205ENST00000476395 LCKP06239 509 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 THP07101 528 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 PSMA3P25788 255 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 UFM1P61960 85 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 LIPEQ05469 1076 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 NPTX1Q15818 432 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 STK11Q15831 433 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 SCIMPQ6UWF3 145 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 GALNT5Q7Z7M9 940 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 SYVN1Q86TM6 617 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 CIR1Q86X95 450 aaPredicted RBP8.22□□□□□ -1.09
VAPB-205ENST00000476395 C8orf59Q8N0T1 100 aaPredicted RBP8.22□□□□□ -1.09
VAPB-205ENST00000476395 MCFD2Q8NI22 146 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 S100ZQ8WXG8 99 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 CCDC120Q96HB5 630 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 TRMOQ9BU70 441 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 C1QTNF3Q9BXJ4 246 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 FSD1LQ9BXM9 530 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 ALG2Q9H553 416 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 EML4Q9HC35 981 aaKnown RBP8.22□□□□□ -1.09
VAPB-205ENST00000476395 MOV10Q9HCE1 1003 aaKnown RBP8.22□□□□□ -1.09
VAPB-205ENST00000476395 CPNE5Q9HCH3 593 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 NT5MQ9NPB1 228 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 FAM118AQ9NWS6 357 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 OPTCQ9UBM4 332 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 C12orf71A8MTZ7 269 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 ZNF99A8MXY4 864 aaPredicted RBP8.21□□□□□ -1.09
VAPB-205ENST00000476395 H3BUI4 141 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 ENPP3O14638 875 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 TFECO14948 347 aaPredicted RBP8.21□□□□□ -1.09
VAPB-205ENST00000476395 VNN2O95498 520 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 C1RP00736 705 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 GSNP06396 782 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 DBTP11182 482 aaKnown RBP8.21□□□□□ -1.09
VAPB-205ENST00000476395 POLR2EP19388 210 aaKnown RBP8.21□□□□□ -1.09
VAPB-205ENST00000476395 WEE1P30291 646 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 CA5AP35218 305 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 POU6F2P78424 691 aaPredicted RBP8.21□□□□□ -1.09
VAPB-205ENST00000476395 CDC20Q12834 499 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 SLAMF1Q13291 335 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 IRF3Q14653 427 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 CDK10Q15131 360 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 MAPRE2Q15555 327 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 SDHAF4Q5VUM1 108 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 NADSYN1Q6IA69 706 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 CORO6Q6QEF8 472 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 TMEM179BQ7Z7N9 219 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 SLC22A9Q8IVM8 553 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 DCP1BQ8IZD4 617 aaKnown RBP8.21□□□□□ -1.09
VAPB-205ENST00000476395 TTC9BQ8N6N2 239 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 MINDY2Q8NBR6 621 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 GLB1L3Q8NCI6 653 aaPredicted RBP8.21□□□□□ -1.09
VAPB-205ENST00000476395 TRPV1Q8NER1 839 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms