RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 ARMC6Q6NXE6 501 aa28.71■■■□□ 2.19
HOXB3-208ENST00000476342 B3GNT8Q7Z7M8 397 aa28.71■■■□□ 2.19
HOXB3-208ENST00000476342 MYO1HQ8N1T3 1032 aa28.71■■■□□ 2.19
HOXB3-208ENST00000476342 EEF1AKMT1Q8WVE0 214 aa28.71■■■□□ 2.19
HOXB3-208ENST00000476342 MRRFQ96E11 262 aaKnown RBP28.71■■■□□ 2.19
HOXB3-208ENST00000476342 ZDHHC12Q96GR4 267 aa28.71■■■□□ 2.19
HOXB3-208ENST00000476342 SEMA6CQ9H3T2 930 aa28.71■■■□□ 2.19
HOXB3-208ENST00000476342 SYTL2Q9HCH5 934 aa28.71■■■□□ 2.19
HOXB3-208ENST00000476342 HRASLS2Q9NWW9 162 aa28.71■■■□□ 2.19
HOXB3-208ENST00000476342 EPHA6Q9UF33 1036 aa28.71■■■□□ 2.19
HOXB3-208ENST00000476342 IKBKGQ9Y6K9 419 aa28.71■■■□□ 2.19
HOXB3-208ENST00000476342 NCOR2Q9Y618 2525 aa28.71■■■□□ 2.19
HOXB3-208ENST00000476342 OR6C74A6NCV1 312 aa28.7■■■□□ 2.19
HOXB3-208ENST00000476342 MATN2O00339 956 aa28.7■■■□□ 2.19
HOXB3-208ENST00000476342 CAPN5O15484 640 aaPredicted RBP28.7■■■□□ 2.19
HOXB3-208ENST00000476342 PSIP1O75475 530 aaKnown RBP28.7■■■□□ 2.19
HOXB3-208ENST00000476342 FAM155BO75949 473 aa28.7■■■□□ 2.19
HOXB3-208ENST00000476342 ITGA2BP08514 1039 aa28.7■■■□□ 2.19
HOXB3-208ENST00000476342 USP10Q14694 798 aaKnown RBP28.7■■■□□ 2.19
HOXB3-208ENST00000476342 UAP1Q16222 522 aaPredicted RBP28.7■■■□□ 2.19
HOXB3-208ENST00000476342 ZNF574Q6ZN55 896 aaPredicted RBP28.7■■■□□ 2.19
HOXB3-208ENST00000476342 UHMK1Q8TAS1 419 aaKnown RBP28.7■■■□□ 2.19
HOXB3-208ENST00000476342 LINGO1Q96FE5 620 aa28.7■■■□□ 2.19
HOXB3-208ENST00000476342 TMEM9Q9P0T7 183 aa28.7■■■□□ 2.19
HOXB3-208ENST00000476342 ICKQ9UPZ9 632 aa28.7■■■□□ 2.19
HOXB3-208ENST00000476342 MSRB2Q9Y3D2 182 aa28.7■■■□□ 2.19
HOXB3-208ENST00000476342 IGHV5-10-1A0A0J9YXX1 117 aa28.69■■■□□ 2.18
HOXB3-208ENST00000476342 INHBAP08476 426 aa28.69■■■□□ 2.18
HOXB3-208ENST00000476342 THRAP10827 490 aa28.69■■■□□ 2.18
HOXB3-208ENST00000476342 ZNF37AP17032 561 aaPredicted RBP28.69■■■□□ 2.18
HOXB3-208ENST00000476342 BDKRB1P46663 353 aa28.69■■■□□ 2.18
HOXB3-208ENST00000476342 IRGCQ6NXR0 463 aa28.69■■■□□ 2.18
HOXB3-208ENST00000476342 CYHR1Q6ZMK1 362 aa28.69■■■□□ 2.18
HOXB3-208ENST00000476342 PIWIL4Q7Z3Z4 852 aaKnown RBP28.69■■■□□ 2.18
HOXB3-208ENST00000476342 RAB42Q8N4Z0 105 aa28.69■■■□□ 2.18
HOXB3-208ENST00000476342 LIN37Q96GY3 246 aaPredicted RBP28.69■■■□□ 2.18
HOXB3-208ENST00000476342 RAB11FIP5Q9BXF6 653 aa28.69■■■□□ 2.18
HOXB3-208ENST00000476342 GPAMQ9HCL2 828 aa28.69■■■□□ 2.18
HOXB3-208ENST00000476342 OR6C2Q9NZP2 312 aa28.69■■■□□ 2.18
HOXB3-208ENST00000476342 PDP2Q9P2J9 529 aa28.69■■■□□ 2.18
HOXB3-208ENST00000476342 C9P02748 559 aa28.69■■■□□ 2.18
HOXB3-208ENST00000476342 STMN1P16949 149 aa28.69■■■□□ 2.18
HOXB3-208ENST00000476342 RAB28P51157 221 aa28.69■■■□□ 2.18
HOXB3-208ENST00000476342 GFERP55789 205 aa28.69■■■□□ 2.18
HOXB3-208ENST00000476342 MARCH9Q86YJ5 346 aa28.69■■■□□ 2.18
HOXB3-208ENST00000476342 NKAPQ8N5F7 415 aaKnown RBP28.69■■■□□ 2.18
HOXB3-208ENST00000476342 SLC44A1Q8WWI5 657 aa28.69■■■□□ 2.18
HOXB3-208ENST00000476342 ASB11Q8WXH4 323 aa28.69■■■□□ 2.18
HOXB3-208ENST00000476342 CCDC74BQ96LY2 380 aa28.69■■■□□ 2.18
HOXB3-208ENST00000476342 TGM7Q96PF1 710 aa28.69■■■□□ 2.18
HOXB3-208ENST00000476342 XKR8Q9H6D3 395 aa28.69■■■□□ 2.18
HOXB3-208ENST00000476342 KLHL3Q9UH77 587 aa28.69■■■□□ 2.18
HOXB3-208ENST00000476342 PLAGL1Q9UM63 463 aa28.69■■■□□ 2.18
HOXB3-208ENST00000476342 EXOC1LA0A1B0GW35 172 aa28.68■■■□□ 2.18
HOXB3-208ENST00000476342 ZBTB14O43829 449 aa28.68■■■□□ 2.18
HOXB3-208ENST00000476342 MPSTP25325 297 aa28.68■■■□□ 2.18
HOXB3-208ENST00000476342 MAP4P27816 1152 aaKnown RBP28.68■■■□□ 2.18
HOXB3-208ENST00000476342 PGGT1BP53609 377 aa28.68■■■□□ 2.18
HOXB3-208ENST00000476342 FOXK2Q01167 660 aa28.68■■■□□ 2.18
HOXB3-208ENST00000476342 SNAP47Q5SQN1 464 aa28.68■■■□□ 2.18
HOXB3-208ENST00000476342 SPNS2Q8IVW8 549 aa28.68■■■□□ 2.18
HOXB3-208ENST00000476342 CEP97Q8IW35 865 aa28.68■■■□□ 2.18
HOXB3-208ENST00000476342 PAFAH2Q99487 392 aa28.68■■■□□ 2.18
HOXB3-208ENST00000476342 CAB39LQ9H9S4 337 aa28.68■■■□□ 2.18
HOXB3-208ENST00000476342 AKAP7Q9P0M2 348 aaPredicted RBP28.68■■■□□ 2.18
HOXB3-208ENST00000476342 ARHGEF33A8MVX0 844 aa28.67■■■□□ 2.18
HOXB3-208ENST00000476342 GFYI3L273 518 aa28.67■■■□□ 2.18
HOXB3-208ENST00000476342 HGSO14964 777 aaPredicted RBP28.67■■■□□ 2.18
HOXB3-208ENST00000476342 C8GP07360 202 aa28.67■■■□□ 2.18
HOXB3-208ENST00000476342 POLR2CP19387 275 aaPredicted RBP28.67■■■□□ 2.18
HOXB3-208ENST00000476342 PKLRP30613 574 aa28.67■■■□□ 2.18
HOXB3-208ENST00000476342 MSH2P43246 934 aa28.67■■■□□ 2.18
HOXB3-208ENST00000476342 SP140Q13342 867 aa28.67■■■□□ 2.18
HOXB3-208ENST00000476342 EIF3IQ13347 325 aaKnown RBP28.67■■■□□ 2.18
HOXB3-208ENST00000476342 GRB7Q14451 532 aa28.67■■■□□ 2.18
HOXB3-208ENST00000476342 ZNF460Q14592 562 aa28.67■■■□□ 2.18
HOXB3-208ENST00000476342 TAOK1Q7L7X3 1001 aa28.67■■■□□ 2.18
HOXB3-208ENST00000476342 FBXO15Q8NCQ5 510 aaPredicted RBP28.67■■■□□ 2.18
HOXB3-208ENST00000476342 CD180Q99467 661 aa28.67■■■□□ 2.18
HOXB3-208ENST00000476342 CCDC187A0A096LP49 1063 aa28.66■■■□□ 2.18
HOXB3-208ENST00000476342 GSAPA4D1B5 854 aa28.66■■■□□ 2.18
HOXB3-208ENST00000476342 POC1B-GALNT4F8VUJ3 575 aa28.66■■■□□ 2.18
HOXB3-208ENST00000476342 BTN3A1O00481 513 aa28.66■■■□□ 2.18
HOXB3-208ENST00000476342 RASGRF2O14827 1237 aa28.66■■■□□ 2.18
HOXB3-208ENST00000476342 TOX3O15405 576 aaPredicted RBP28.66■■■□□ 2.18
HOXB3-208ENST00000476342 TSPAN12O95859 305 aa28.66■■■□□ 2.18
HOXB3-208ENST00000476342 TUBBP07437 444 aa28.66■■■□□ 2.18
HOXB3-208ENST00000476342 TPBGLP0DKB5 382 aa28.66■■■□□ 2.18
HOXB3-208ENST00000476342 SLC29A2Q14542 456 aa28.66■■■□□ 2.18
HOXB3-208ENST00000476342 EEF1AKMT2Q5JPI9 291 aaKnown RBP28.66■■■□□ 2.18
HOXB3-208ENST00000476342 UBE2R2Q712K3 238 aaPredicted RBP28.66■■■□□ 2.18
HOXB3-208ENST00000476342 RCBTB1Q8NDN9 531 aa28.66■■■□□ 2.18
HOXB3-208ENST00000476342 UBLCP1Q8WVY7 318 aaPredicted RBP28.66■■■□□ 2.18
HOXB3-208ENST00000476342 PDLIM5Q96HC4 596 aaKnown RBP28.66■■■□□ 2.18
HOXB3-208ENST00000476342 CMKLR1Q99788 373 aa28.66■■■□□ 2.18
HOXB3-208ENST00000476342 SPATA7Q9P0W8 599 aa28.66■■■□□ 2.18
HOXB3-208ENST00000476342 CIDEBQ9UHD4 219 aa28.66■■■□□ 2.18
HOXB3-208ENST00000476342 C2orf74A8MZ97 194 aa28.65■■■□□ 2.18
HOXB3-208ENST00000476342 BTN3A3O00478 584 aa28.65■■■□□ 2.18
HOXB3-208ENST00000476342 RASSF9O75901 435 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms