RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 UGDHO60701 494 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 TRIM3O75382 744 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 SCO1O75880 301 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 CABYRO75952 493 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 OAZ2O95190 189 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 EPOP01588 193 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 FGGP02679 453 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 ERBB2P04626 1255 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 RNF224P0DH78 156 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 ZP3P21754 424 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 XPAP23025 273 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 SDHAP31040 664 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 PIK3CBP42338 1070 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 MAGEA4P43358 317 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 CASP4P49662 377 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 SERPINB9P50453 376 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 SLC16A1P53985 500 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 CASP9P55211 416 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 ERVFC1P60507 584 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 INCA1Q0VD86 236 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 STX4Q12846 297 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 SEMA3BQ13214 749 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 TUSC3Q13454 348 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 PNOCQ13519 176 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 DYRK1AQ13627 763 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 DDX39BQ13838 428 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 NFYCQ13952 458 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 KCNJ12Q14500 433 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 TRAM2Q15035 370 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 CNN3Q15417 329 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 TARBP2Q15633 366 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 PSMD5Q16401 504 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 PDK4Q16654 411 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 SLC39A12Q504Y0 691 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 CCNYL2Q5T2Q4 361 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 ADGRF1Q5T601 910 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 KLHDC7AQ5VTJ3 777 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 FAM160B1Q5W0V3 765 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 ARMC6Q6NXE6 501 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 SCYL2Q6P3W7 929 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 VITQ6UXI7 678 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 DPY19L3Q6ZPD9 716 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 PDZD4Q76G19 769 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 SSX9Q7RTT3 188 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 EFL1Q7Z2Z2 1120 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 FAM122BQ7Z309 247 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 KDELC2Q7Z4H8 507 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 RABEPKQ7Z6M1 372 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 AMIGO1Q86WK6 493 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 PHYKPLQ8IUZ5 450 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 SLC41A1Q8IVJ1 513 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 CHERPQ8IWX8 916 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 TP53INP2Q8IXH6 220 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 DSELQ8IZU8 1212 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 RBFAQ8N0V3 343 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 KRT78Q8N1N4 520 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 PQLC1Q8N2U9 271 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 OR2C3Q8N628 320 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 FAM181AQ8N9Y4 354 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 KYQ8NBH2 561 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 ELMO1Q92556 727 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 PTERQ96BW5 349 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 FAM122AQ96E09 287 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 RAX2Q96IS3 184 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 PPP1R36Q96LQ0 422 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 ZNF558Q96NG5 402 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 AGAP2Q99490 1192 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 CGRRF1Q99675 332 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 SSX3Q99909 188 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 DPYSL5Q9BPU6 564 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 COPS4Q9BT78 406 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 NPLQ9BXD5 320 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 MMP27Q9H306 513 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 MINDY3Q9H8M7 445 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 AGO3Q9H9G7 860 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 NANOGQ9H9S0 305 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 FBXO8Q9NRD0 319 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 CD274Q9NZQ7 290 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 ANKFY1Q9P2R3 1169 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 MORF4L1Q9UBU8 362 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 CTSFQ9UBX1 484 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 FBLN5Q9UBX5 448 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 EPHA6Q9UF33 1036 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 POLLQ9UGP5 575 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 CPA4Q9UI42 421 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 BTNL2Q9UIR0 455 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 ADAMTS6Q9UKP5 1117 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 PLA2G4CQ9UP65 541 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 MFHAS1Q9Y4C4 1052 aa5.88□□□□□ -1.47
ECHDC1-215ENST00000475319 ABCB11O95342 1321 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 USP6P35125 1406 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 ARHGEF28Q8N1W1 1705 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 TNS1Q9HBL0 1735 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 TTC26A0AVF1 554 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 MFSD2BA6NFX1 497 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 TUBAL3A6NHL2 446 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 CCDC154A6NI56 674 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 OR6C70A6NIJ9 312 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 A8MXE2 369 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 H7C0S8 307 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms