RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 GOT2P00505 430 aaKnown RBP7.81□□□□□ -1.16
USP48-207ENST00000471752 IFNB1P01574 187 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 MSNP26038 577 aaKnown RBP7.81□□□□□ -1.16
USP48-207ENST00000471752 RPL22P35268 128 aaKnown RBP7.81□□□□□ -1.16
USP48-207ENST00000471752 TNNT3P45378 269 aaPredicted RBP7.81□□□□□ -1.16
USP48-207ENST00000471752 KCNJ1P48048 391 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 CD97P48960 835 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 PMS2P54278 862 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 SNRPNP63162 240 aaKnown RBP7.81□□□□□ -1.16
USP48-207ENST00000471752 MC1RQ01726 317 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 ACY1Q03154 408 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 CACNG1Q06432 222 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 ATP1A4Q13733 1029 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 UBAP2LQ14157 1087 aaKnown RBP7.81□□□□□ -1.16
USP48-207ENST00000471752 UGT8Q16880 541 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 GPR33Q49SQ1 333 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 TCTN3Q6NUS6 607 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 TAX1BP1Q86VP1 789 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 AMIGO1Q86WK6 493 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 LINC01555Q8NAE3 123 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 ACVR1CQ8NER5 493 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.81□□□□□ -1.16
USP48-207ENST00000471752 ZFPM2Q8WW38 1151 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 ELMO1Q92556 727 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 ULK4Q96C45 1275 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 MENTQ9BUN1 341 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 EFHD1Q9BUP0 239 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 NUDT9Q9BW91 350 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 ING2Q9H160 280 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 LRRC40Q9H9A6 602 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 ACTR5Q9H9F9 607 aaPredicted RBP7.81□□□□□ -1.16
USP48-207ENST00000471752 ZBTB20Q9HC78 741 aaPredicted RBP7.81□□□□□ -1.16
USP48-207ENST00000471752 MLXIPLQ9NP71 852 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 CHRAC1Q9NRG0 131 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 C1GALT1Q9NS00 363 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 ACTR10Q9NZ32 417 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 DHCR7Q9UBM7 475 aaKnown RBP7.81□□□□□ -1.16
USP48-207ENST00000471752 KCND3Q9UK17 655 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 GUCA1BQ9UMX6 200 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 PCDHB3Q9Y5E6 796 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 COLEC10Q9Y6Z7 277 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 C21orf140B9A014 251 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 GOLGA8KD6RF30 607 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 GOLGA8TH3BQL2 631 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 KRT86O43790 486 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 CPNE3O75131 537 aaKnown RBP7.8□□□□□ -1.16
USP48-207ENST00000471752 AVILO75366 819 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 STK10O94804 968 aaKnown RBP7.8□□□□□ -1.16
USP48-207ENST00000471752 CHRM5P08912 532 aaPredicted RBP7.8□□□□□ -1.16
USP48-207ENST00000471752 GNLYP22749 145 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 MCM3P25205 808 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 NMBRP28336 390 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 HADHAP40939 763 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 KLRB1Q12918 225 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 TSTD2Q5T7W7 516 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 FCRL6Q6DN72 434 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 ARMC6Q6NXE6 501 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 KLHL35Q6PF15 583 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 SPESP1Q6UW49 350 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 KMT5CQ86Y97 462 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 SLC13A5Q86YT5 568 aaPredicted RBP7.8□□□□□ -1.16
USP48-207ENST00000471752 APLFQ8IW19 511 aaPredicted RBP7.8□□□□□ -1.16
USP48-207ENST00000471752 SYTL1Q8IYJ3 562 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 DNAJC22Q8N4W6 341 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 RBMXL3Q8N7X1 1067 aaKnown RBP7.8□□□□□ -1.16
USP48-207ENST00000471752 TEX19Q8NA77 164 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 Q8NA96 180 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 FDCSPQ8NFU4 85 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 CFAP61Q8NHU2 1237 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 STYXQ8WUJ0 223 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 CLIP3Q96DZ5 547 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 FCRL4Q96PJ5 515 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 CD180Q99467 661 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 GPR87Q9BY21 358 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 CASS4Q9NQ75 786 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 TSR3Q9UJK0 312 aaKnown RBP7.8□□□□□ -1.16
USP48-207ENST00000471752 TCFL5Q9UL49 500 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 NFS1Q9Y697 457 aa7.8□□□□□ -1.16
USP48-207ENST00000471752 CNTRLQ7Z7A1 2325 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 FER1L5A0AVI2 2057 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 CFAP99D6REC4 459 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 MKRN2OSH3BPM6 223 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 SEMA7AO75326 666 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 CEACAM4O75871 244 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 SUN1O94901 812 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 MT-ND3P03897 115 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 RALBP11234 206 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 ARNTP27540 789 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 PSMB5P28074 263 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 NDUFS1P28331 727 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 CD151P48509 253 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 SESN2P58004 480 aaPredicted RBP7.79□□□□□ -1.16
USP48-207ENST00000471752 RPS15P62841 145 aaKnown RBP7.79□□□□□ -1.16
USP48-207ENST00000471752 ACVR1Q04771 509 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 HSPA14Q0VDF9 509 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 KIF5AQ12840 1032 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 TRIP13Q15645 432 aaPredicted RBP7.79□□□□□ -1.16
USP48-207ENST00000471752 PLEKHN1Q494U1 663 aaPredicted RBP7.79□□□□□ -1.16
USP48-207ENST00000471752 TMTC4Q5T4D3 741 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 MEI1Q5TIA1 1274 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms