RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 EIF2B4Q9UI10 523 aaKnown RBP8.42□□□□□ -1.06
CD47-204ENST00000471694 FBXW11Q9UKB1 542 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 TMPRSS11EQ9UL52 423 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 A0A1W2PPL8 197 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 RIPK2O43353 540 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 DLDP09622 509 aaKnown RBP8.42□□□□□ -1.06
CD47-204ENST00000471694 SRP54P61011 504 aaKnown RBP8.42□□□□□ -1.06
CD47-204ENST00000471694 NFKB2Q00653 900 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 NRG1Q02297 640 aaPredicted RBP8.42□□□□□ -1.06
CD47-204ENST00000471694 OR4C6Q8NH72 309 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 EPS8L1Q8TE68 723 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 MFSD3Q96ES6 412 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 BRD7Q9NPI1 651 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 ZDHHC3Q9NYG2 299 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 A6NLC8 198 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 ANKRD65E5RJM6 399 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 ATP1B2P14415 290 aaPredicted RBP8.42□□□□□ -1.06
CD47-204ENST00000471694 ARL3P36405 182 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 KCNQ1P51787 676 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 OR2B6P58173 313 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 DCST1Q5T197 706 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 SH3PXD2AQ5TCZ1 1133 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 PGM2L1Q6PCE3 622 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 CEP97Q8IW35 865 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 JOSD2Q8TAC2 188 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 FAM84AQ96KN4 292 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 EPB41L1Q9H4G0 881 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 IGSF9Q9P2J2 1179 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 A0A1W2PQ72 361 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 CCL22O00626 93 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 SNAP91O60641 907 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 EPCAMP16422 314 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 CHRNB4P30926 498 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 GMFBP60983 142 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 RAB2AP61019 212 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 DSG1Q02413 1049 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 DNM1P34Q6PK57 102 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 SMARCD3Q6STE5 483 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 MBOAT1Q6ZNC8 495 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 ZBED6CLQ96FA7 236 aaPredicted RBP8.42□□□□□ -1.06
CD47-204ENST00000471694 NPLQ9BXD5 320 aaPredicted RBP8.42□□□□□ -1.06
CD47-204ENST00000471694 TRIM2Q9C040 744 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 IPPKQ9H8X2 491 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 GPN2Q9H9Y4 310 aaPredicted RBP8.42□□□□□ -1.06
CD47-204ENST00000471694 HMG20AQ9NP66 347 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 PSMD11O00231 422 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 TGM5O43548 720 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 PLIN3O60664 434 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 TRIM3O75382 744 aaPredicted RBP8.41□□□□□ -1.06
CD47-204ENST00000471694 SCGB2A1O75556 95 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 LRIG2O94898 1065 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 ACVR2AP27037 513 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 NR0B1P51843 470 aaKnown RBP8.41□□□□□ -1.06
CD47-204ENST00000471694 MTTPP55157 894 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 DCTN2Q13561 401 aaKnown RBP8.41□□□□□ -1.06
CD47-204ENST00000471694 MLC1Q15049 377 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 PLGLAQ15195 96 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 NAPRTQ6XQN6 538 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 CRYBG2Q8N1P7 616 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 RNF148Q8N7C7 305 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 OR14L1PQ8NHC6 308 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 FNIP1Q8TF40 1166 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 PTCHD1Q96NR3 888 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 RMI1Q9H9A7 625 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 SCML2Q9UQR0 700 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 ATRNL1Q5VV63 1379 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 SH3D21A4FU49 640 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 POLR1CO15160 346 aaPredicted RBP8.41□□□□□ -1.06
CD47-204ENST00000471694 CST3P01034 146 aaPredicted RBP8.41□□□□□ -1.06
CD47-204ENST00000471694 SHMT2P34897 504 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 NOMO3P69849 1222 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 SLBPQ14493 270 aaKnown RBP eCLIP8.41□□□□□ -1.06
CD47-204ENST00000471694 AP1ARQ63HQ0 302 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 TMEM225Q6GV28 225 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 DGLUCYQ7Z3D6 616 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 ZNF433Q8N7K0 673 aaPredicted RBP8.41□□□□□ -1.06
CD47-204ENST00000471694 NINJ1Q92982 152 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 HAO1Q9UJM8 370 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 SAMHD1Q9Y3Z3 626 aaKnown RBP8.41□□□□□ -1.06
CD47-204ENST00000471694 PARP4Q9UKK3 1724 aaKnown RBP8.41□□□□□ -1.06
CD47-204ENST00000471694 NPC1O15118 1278 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 HNRNPLP14866 589 aaKnown RBP eCLIP8.41□□□□□ -1.06
CD47-204ENST00000471694 ZNF30P17039 623 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 L1CAMP32004 1257 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 DHCR24Q15392 516 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 CST6Q15828 149 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 RFX4Q33E94 735 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 CARD17Q5XLA6 110 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 AADATQ8N5Z0 425 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 PPP1R14BQ96C90 147 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 ILVBLA1L0T0 632 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 TSPAN6O43657 245 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 SNAI1O95863 264 aaPredicted RBP8.41□□□□□ -1.06
CD47-204ENST00000471694 GNAZP19086 355 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 KCNA3P22001 575 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 HSD3B2P26439 372 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 NAGLUP54802 743 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 SCN1BQ07699 218 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 PDPRQ8NCN5 879 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 SPATA22Q8NHS9 363 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms