RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 THOC5Q13769 683 aaKnown RBP11.18□□□□□ -0.62
CDHR3-205ENST00000468143 TUBB2AQ13885 445 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 TMED2Q15363 201 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 TBR1Q16650 682 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 TMTC4Q5T4D3 741 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 RNASEH2BQ5TBB1 312 aaKnown RBP11.18□□□□□ -0.62
CDHR3-205ENST00000468143 C16orf46Q6P387 395 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 FAM199XQ6PEV8 388 aaPredicted RBP11.18□□□□□ -0.62
CDHR3-205ENST00000468143 CENPUQ71F23 418 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 OTOAQ7RTW8 1153 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 HOOK3Q86VS8 718 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 LRRC6Q86X45 466 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 CREG2Q8IUH2 290 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 DENND6AQ8IWF6 608 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 FAM20CQ8IXL6 584 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 C17orf53Q8N3J3 647 aaPredicted RBP11.18□□□□□ -0.62
CDHR3-205ENST00000468143 EXD3Q8N9H8 876 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 SKA2Q8WVK7 121 aaPredicted RBP11.18□□□□□ -0.62
CDHR3-205ENST00000468143 LPGAT1Q92604 370 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 SIGLEC10Q96LC7 697 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 TRAPPC9Q96Q05 1148 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 PANX3Q96QZ0 392 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 OR2A14Q96R47 310 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 NAPGQ99747 312 aaPredicted RBP11.18□□□□□ -0.62
CDHR3-205ENST00000468143 ARHGAP9Q9BRR9 750 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 TUBB2BQ9BVA1 445 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 XAB2Q9HCS7 855 aaKnown RBP11.18□□□□□ -0.62
CDHR3-205ENST00000468143 KCND1Q9NSA2 647 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 C20orf96Q9NUD7 363 aaPredicted RBP11.18□□□□□ -0.62
CDHR3-205ENST00000468143 CROTQ9UKG9 612 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 RUVBL2Q9Y230 463 aaKnown RBP11.18□□□□□ -0.62
CDHR3-205ENST00000468143 NFS1Q9Y697 457 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 SAR1BQ9Y6B6 198 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 SDK2Q58EX2 2172 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 CHD6Q8TD26 2715 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 DSPP15924 2871 aaKnown RBP11.17□□□□□ -0.62
CDHR3-205ENST00000468143 ZCWPW2A0A1B0GU75 182 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 CTAGE9A4FU28 777 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 KRT87PA6NCN2 255 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 TK2O00142 265 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 DNALI1O14645 258 aaPredicted RBP11.17□□□□□ -0.62
CDHR3-205ENST00000468143 FANCGO15287 622 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 SCRG1O75711 98 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 C1QL1O75973 258 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 SLCO2B1O94956 709 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 S1PR4O95977 384 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 UGT2B7P16662 529 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 TCN2P20062 427 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 BDKRB1P46663 353 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 PTK6Q13882 451 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 MAP7Q14244 749 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 TYSND1Q2T9J0 566 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 CCSMST1Q4G0I0 132 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 DNAJC21Q5F1R6 531 aaKnown RBP11.17□□□□□ -0.62
CDHR3-205ENST00000468143 ATP1A1-AS1Q5TC04 95 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 IZUMO3Q5VZ72 239 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 CYB5D1Q6P9G0 228 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 SPESP1Q6UW49 350 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 TMEM135Q86UB9 458 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 TAX1BP1Q86VP1 789 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 CILP2Q8IUL8 1156 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 TMEM126BQ8IUX1 230 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 LSM14AQ8ND56 463 aaKnown RBP11.17□□□□□ -0.62
CDHR3-205ENST00000468143 OR1L3Q8NH93 324 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 GSDMBQ8TAX9 411 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 SLC45A3Q96JT2 553 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 PWWP2AQ96N64 755 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 RUFY1Q96T51 708 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 TCF12Q99081 682 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 PITPNM3Q9BZ71 974 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 FAM60AQ9NP50 221 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 FBXO6Q9NRD1 293 aaPredicted RBP11.17□□□□□ -0.62
CDHR3-205ENST00000468143 PADI1Q9ULC6 663 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 BTRCQ9Y297 605 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 KLHL20Q9Y2M5 609 aa11.17□□□□□ -0.62
CDHR3-205ENST00000468143 BAHCC1Q9P281 2608 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 ZNF891A8MT65 544 aaPredicted RBP11.16□□□□□ -0.62
CDHR3-205ENST00000468143 TMEM150CB9EJG8 249 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 KPNA5O15131 536 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 PFDN6O15212 129 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 MAP3K7O43318 606 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 FAM87AP0C7U9 286 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 ATXN8OSP0DMR3 200 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 PKMP14618 531 aaKnown RBP11.16□□□□□ -0.62
CDHR3-205ENST00000468143 OGNP20774 298 aaKnown RBP11.16□□□□□ -0.62
CDHR3-205ENST00000468143 PEBP1P30086 187 aaKnown RBP11.16□□□□□ -0.62
CDHR3-205ENST00000468143 MAGEA3P43357 314 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 MRPS25P82663 173 aaKnown RBP11.16□□□□□ -0.62
CDHR3-205ENST00000468143 DHX9Q08211 1270 aaKnown RBP11.16□□□□□ -0.62
CDHR3-205ENST00000468143 ERV3-1Q14264 604 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 GRB7Q14451 532 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 ZIC1Q15915 447 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 KYNUQ16719 465 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 LONRF1Q17RB8 773 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 MSS51Q4VC12 460 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 HP1BP3Q5SSJ5 553 aaPredicted RBP11.16□□□□□ -0.62
CDHR3-205ENST00000468143 PLEKHS1Q5SXH7 462 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 RNF187Q5TA31 235 aaPredicted RBP11.16□□□□□ -0.62
CDHR3-205ENST00000468143 ZNF470Q6ECI4 717 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 CNSTQ6PJW8 725 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms