RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 LINC00032P0C843 101 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 PRPS2P11908 318 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 JUPP14923 745 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 NUDT1P36639 197 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 CASP2P42575 452 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 GNPDA1P46926 289 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 CTSCP53634 463 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 FOXA1P55317 472 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 KCNK10P57789 538 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 AP2B1P63010 937 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 SLC25A3Q00325 362 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 CDK3Q00526 305 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 DLX2Q07687 328 aaPredicted RBP9.94□□□□□ -0.82
MSH5-213ENST00000468136 DMPKQ09013 629 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 CSTF3Q12996 717 aaKnown RBP9.94□□□□□ -0.82
MSH5-213ENST00000468136 PRKG2Q13237 762 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 LAPTM5Q13571 262 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 E2F2Q14209 437 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 IMPG1Q17R60 797 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 KHDC1Q4VXA5 237 aaKnown RBP9.94□□□□□ -0.82
MSH5-213ENST00000468136 SAMD4BQ5PRF9 694 aaKnown RBP9.94□□□□□ -0.82
MSH5-213ENST00000468136 C6orf136Q5SQH8 315 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 CACHD1Q5VU97 1274 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 CAPN13Q6MZZ7 669 aaPredicted RBP9.94□□□□□ -0.82
MSH5-213ENST00000468136 ZFP1Q6P2D0 407 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 IL27RAQ6UWB1 636 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.94□□□□□ -0.82
MSH5-213ENST00000468136 EP400NLQ6ZTU2 488 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 RPS27LQ71UM5 84 aaKnown RBP9.94□□□□□ -0.82
MSH5-213ENST00000468136 AMZ2Q86W34 360 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 RAB42Q8N4Z0 105 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 SNX31Q8N9S9 440 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 FNDC5Q8NAU1 212 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 OR52B6Q8NGF0 335 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 OR56A3Q8NH54 315 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 STARD8Q92502 1023 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 POP5Q969H6 163 aaKnown RBP9.94□□□□□ -0.82
MSH5-213ENST00000468136 UBE2E3Q969T4 207 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 RCN3Q96D15 328 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 C3orf30Q96M34 536 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 ACOX2Q99424 681 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 GAS2L1Q99501 681 aaPredicted RBP9.94□□□□□ -0.82
MSH5-213ENST00000468136 ZBTB18Q99592 522 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 TIMM29Q9BSF4 260 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 PCBD2Q9H0N5 130 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 OR2AG1Q9H205 316 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 MUC13Q9H3R2 512 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 EHD1Q9H4M9 534 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 ELOVL6Q9H5J4 265 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 WDR26Q9H7D7 661 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 NMRK1Q9NWW6 199 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 FBXL12Q9NXK8 326 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 STX18Q9P2W9 335 aaKnown RBP9.94□□□□□ -0.82
MSH5-213ENST00000468136 ATXN10Q9UBB4 475 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 SLC7A8Q9UHI5 535 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 LEF1Q9UJU2 399 aaPredicted RBP9.94□□□□□ -0.82
MSH5-213ENST00000468136 CROTQ9UKG9 612 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 TIMM22Q9Y584 194 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 KCNE2Q9Y6J6 123 aa9.94□□□□□ -0.82
MSH5-213ENST00000468136 IGLON5A6NGN9 336 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 ARHGEF33A8MVX0 844 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 LOC730098B7Z3J9 87 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 MANBAO00462 879 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 MRASO14807 208 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 LSM1O15116 133 aaKnown RBP9.93□□□□□ -0.82
MSH5-213ENST00000468136 INPP4BO15327 924 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 CFLARO15519 480 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 PI15O43692 258 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 PEX11AO75192 247 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 MTX2O75431 263 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 RNASEH2AO75792 299 aaKnown RBP9.93□□□□□ -0.82
MSH5-213ENST00000468136 C1orf105O95561 183 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 ALDOCP09972 364 aaKnown RBP9.93□□□□□ -0.82
MSH5-213ENST00000468136 BMP1P13497 986 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 HOXB2P14652 356 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 GNAZP19086 355 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 KELP23276 732 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 ME2P23368 584 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 JAK1P23458 1154 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 PRDX3P30048 256 aaKnown RBP9.93□□□□□ -0.82
MSH5-213ENST00000468136 TIE1P35590 1138 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 CLNS1AP54105 237 aaKnown RBP9.93□□□□□ -0.82
MSH5-213ENST00000468136 CTBSQ01459 385 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 TRAP1Q12931 704 aaKnown RBP9.93□□□□□ -0.82
MSH5-213ENST00000468136 LRP8Q14114 963 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 RCAN2Q14206 197 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 NR6A1Q15406 480 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 CCDC6Q16204 474 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 WSCD2Q2TBF2 565 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 AP5B1Q2VPB7 878 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 PTCHD3Q3KNS1 767 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 PAGE2BQ5JRK9 111 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 REP15Q6BDI9 236 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 BLOC1S3Q6QNY0 202 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 AGTRAPQ6RW13 159 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 Q6ZSR9 355 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 HORMAD1Q86X24 394 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 ZFAND4Q86XD8 727 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 CFAP206Q8IYR0 622 aa9.93□□□□□ -0.82
MSH5-213ENST00000468136 SYNPOQ8N3V7 929 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms