RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 AGXTP21549 392 aa18.52■□□□□ 0.56
COL9A3-206ENST00000466532 ACADLP28330 430 aa18.52■□□□□ 0.56
COL9A3-206ENST00000466532 CDH17Q12864 832 aa18.52■□□□□ 0.56
COL9A3-206ENST00000466532 PAPD7Q5XG87 772 aaKnown RBP18.52■□□□□ 0.56
COL9A3-206ENST00000466532 NAPRTQ6XQN6 538 aa18.52■□□□□ 0.56
COL9A3-206ENST00000466532 TBC1D21Q8IYX1 336 aa18.52■□□□□ 0.56
COL9A3-206ENST00000466532 GPR135Q8IZ08 494 aa18.52■□□□□ 0.56
COL9A3-206ENST00000466532 EFCAB3Q8N7B9 438 aa18.52■□□□□ 0.56
COL9A3-206ENST00000466532 ATG4AQ8WYN0 398 aa18.52■□□□□ 0.56
COL9A3-206ENST00000466532 HES6Q96HZ4 224 aa18.52■□□□□ 0.56
COL9A3-206ENST00000466532 DESI2Q9BSY9 194 aa18.52■□□□□ 0.56
COL9A3-206ENST00000466532 FAM60AQ9NP50 221 aa18.52■□□□□ 0.56
COL9A3-206ENST00000466532 POLG2Q9UHN1 485 aa18.52■□□□□ 0.56
COL9A3-206ENST00000466532 ZNF451Q9Y4E5 1061 aa18.52■□□□□ 0.56
COL9A3-206ENST00000466532 PCM1Q15154 2024 aa18.52■□□□□ 0.55
COL9A3-206ENST00000466532 SLC5A10A0PJK1 596 aa18.51■□□□□ 0.55
COL9A3-206ENST00000466532 ERI2A8K979 691 aaKnown RBP18.51■□□□□ 0.55
COL9A3-206ENST00000466532 ZNF185O15231 689 aa18.51■□□□□ 0.55
COL9A3-206ENST00000466532 VPS4BO75351 444 aa18.51■□□□□ 0.55
COL9A3-206ENST00000466532 CEACAM4O75871 244 aa18.51■□□□□ 0.55
COL9A3-206ENST00000466532 GAS8O95995 478 aa18.51■□□□□ 0.55
COL9A3-206ENST00000466532 CHRM5P08912 532 aaPredicted RBP18.51■□□□□ 0.55
COL9A3-206ENST00000466532 DEFB110Q30KQ9 67 aa18.51■□□□□ 0.55
COL9A3-206ENST00000466532 ZNF385CQ66K41 422 aaPredicted RBP18.51■□□□□ 0.55
COL9A3-206ENST00000466532 TMEM139Q8IV31 216 aa18.51■□□□□ 0.55
COL9A3-206ENST00000466532 ZBTB2Q8N680 514 aa18.51■□□□□ 0.55
COL9A3-206ENST00000466532 OR13J1Q8NGT2 312 aa18.51■□□□□ 0.55
COL9A3-206ENST00000466532 OR5K2Q8NHB8 316 aa18.51■□□□□ 0.55
COL9A3-206ENST00000466532 CPT1CQ8TCG5 803 aa18.51■□□□□ 0.55
COL9A3-206ENST00000466532 TCTN2Q96GX1 697 aa18.51■□□□□ 0.55
COL9A3-206ENST00000466532 OR2A14Q96R47 310 aa18.51■□□□□ 0.55
COL9A3-206ENST00000466532 SPHK1Q9NYA1 384 aa18.51■□□□□ 0.55
COL9A3-206ENST00000466532 IMPACTQ9P2X3 320 aa18.51■□□□□ 0.55
COL9A3-206ENST00000466532 VPS4AQ9UN37 437 aa18.51■□□□□ 0.55
COL9A3-206ENST00000466532 G3BP2Q9UN86 482 aaKnown RBP18.51■□□□□ 0.55
COL9A3-206ENST00000466532 PADI2Q9Y2J8 665 aa18.51■□□□□ 0.55
COL9A3-206ENST00000466532 HEATR9A2RTY3 570 aa18.5■□□□□ 0.55
COL9A3-206ENST00000466532 BHMG1C9JSJ3 638 aaPredicted RBP18.5■□□□□ 0.55
COL9A3-206ENST00000466532 HCRTR1O43613 425 aa18.5■□□□□ 0.55
COL9A3-206ENST00000466532 OR2B3O76000 313 aa18.5■□□□□ 0.55
COL9A3-206ENST00000466532 TPBGLP0DKB5 382 aa18.5■□□□□ 0.55
COL9A3-206ENST00000466532 UQCRFS1P47985 274 aa18.5■□□□□ 0.55
COL9A3-206ENST00000466532 PLOD1Q02809 727 aaPredicted RBP18.5■□□□□ 0.55
COL9A3-206ENST00000466532 ZIC1Q15915 447 aa18.5■□□□□ 0.55
COL9A3-206ENST00000466532 LYPLAL1Q5VWZ2 237 aa18.5■□□□□ 0.55
COL9A3-206ENST00000466532 PPP1R21Q6ZMI0 780 aa18.5■□□□□ 0.55
COL9A3-206ENST00000466532 MED25Q71SY5 747 aa18.5■□□□□ 0.55
COL9A3-206ENST00000466532 RAB43Q86YS6 212 aa18.5■□□□□ 0.55
COL9A3-206ENST00000466532 TMEM102Q8N9M5 508 aaPredicted RBP18.5■□□□□ 0.55
COL9A3-206ENST00000466532 FDCSPQ8NFU4 85 aa18.5■□□□□ 0.55
COL9A3-206ENST00000466532 HDAC10Q969S8 669 aa18.5■□□□□ 0.55
COL9A3-206ENST00000466532 TTC1Q99614 292 aa18.5■□□□□ 0.55
COL9A3-206ENST00000466532 NUDT9Q9BW91 350 aa18.5■□□□□ 0.55
COL9A3-206ENST00000466532 ETNK1Q9HBU6 452 aa18.5■□□□□ 0.55
COL9A3-206ENST00000466532 OR6C2Q9NZP2 312 aa18.5■□□□□ 0.55
COL9A3-206ENST00000466532 SLC2A6Q9UGQ3 507 aa18.5■□□□□ 0.55
COL9A3-206ENST00000466532 PLAGL1Q9UM63 463 aa18.5■□□□□ 0.55
COL9A3-206ENST00000466532 PCDHGB7Q9Y5F8 929 aa18.5■□□□□ 0.55
COL9A3-206ENST00000466532 CAPN6Q9Y6Q1 641 aa18.5■□□□□ 0.55
COL9A3-206ENST00000466532 AP1M2Q9Y6Q5 423 aa18.5■□□□□ 0.55
COL9A3-206ENST00000466532 UTP20O75691 2785 aaKnown RBP18.5■□□□□ 0.55
COL9A3-206ENST00000466532 A0A0J9YY10 115 aa18.49■□□□□ 0.55
COL9A3-206ENST00000466532 A6NL46 340 aa18.49■□□□□ 0.55
COL9A3-206ENST00000466532 F8W8V4 182 aa18.49■□□□□ 0.55
COL9A3-206ENST00000466532 KDM1AO60341 852 aa18.49■□□□□ 0.55
COL9A3-206ENST00000466532 OR1I1O60431 355 aa18.49■□□□□ 0.55
COL9A3-206ENST00000466532 GOT2P00505 430 aaKnown RBP18.49■□□□□ 0.55
COL9A3-206ENST00000466532 CBSLP0DN79 551 aa18.49■□□□□ 0.55
COL9A3-206ENST00000466532 STIP1P31948 543 aaKnown RBP18.49■□□□□ 0.55
COL9A3-206ENST00000466532 OTX2P32243 289 aa18.49■□□□□ 0.55
COL9A3-206ENST00000466532 CBSP35520 551 aa18.49■□□□□ 0.55
COL9A3-206ENST00000466532 FDFT1P37268 417 aa18.49■□□□□ 0.55
COL9A3-206ENST00000466532 GABRA4P48169 554 aa18.49■□□□□ 0.55
COL9A3-206ENST00000466532 RRADP55042 308 aa18.49■□□□□ 0.55
COL9A3-206ENST00000466532 CSE1LP55060 971 aaKnown RBP18.49■□□□□ 0.55
COL9A3-206ENST00000466532 ATP1A4Q13733 1029 aa18.49■□□□□ 0.55
COL9A3-206ENST00000466532 TSTD2Q5T7W7 516 aa18.49■□□□□ 0.55
COL9A3-206ENST00000466532 SEL1L2Q5TEA6 688 aa18.49■□□□□ 0.55
COL9A3-206ENST00000466532 C1orf189Q5VU69 101 aa18.49■□□□□ 0.55
COL9A3-206ENST00000466532 AFTPHQ6ULP2 937 aa18.49■□□□□ 0.55
COL9A3-206ENST00000466532 FLVCR1-AS1Q8TAF5 88 aa18.49■□□□□ 0.55
COL9A3-206ENST00000466532 C17orf62Q9BQA9 187 aa18.49■□□□□ 0.55
COL9A3-206ENST00000466532 DHRS4Q9BTZ2 278 aa18.49■□□□□ 0.55
COL9A3-206ENST00000466532 SPRTNQ9H040 489 aaPredicted RBP18.49■□□□□ 0.55
COL9A3-206ENST00000466532 ESPL1Q14674 2120 aa18.49■□□□□ 0.55
COL9A3-206ENST00000466532 USP9XQ93008 2570 aaPredicted RBP18.48■□□□□ 0.55
COL9A3-206ENST00000466532 ISM1B1AKI9 464 aa18.48■□□□□ 0.55
COL9A3-206ENST00000466532 E7EVH7 732 aa18.48■□□□□ 0.55
COL9A3-206ENST00000466532 H3BMH7 237 aa18.48■□□□□ 0.55
COL9A3-206ENST00000466532 LIASO43766 372 aa18.48■□□□□ 0.55
COL9A3-206ENST00000466532 DPM1O60762 260 aa18.48■□□□□ 0.55
COL9A3-206ENST00000466532 SORBS2O94875 1100 aaKnown RBP18.48■□□□□ 0.55
COL9A3-206ENST00000466532 SUN1O94901 812 aa18.48■□□□□ 0.55
COL9A3-206ENST00000466532 IFNB1P01574 187 aa18.48■□□□□ 0.55
COL9A3-206ENST00000466532 ATXN8OSP0DMR3 200 aa18.48■□□□□ 0.55
COL9A3-206ENST00000466532 GP1BBP13224 206 aa18.48■□□□□ 0.55
COL9A3-206ENST00000466532 GNLYP22749 145 aa18.48■□□□□ 0.55
COL9A3-206ENST00000466532 GRIA1P42261 906 aa18.48■□□□□ 0.55
COL9A3-206ENST00000466532 OASLQ15646 514 aaKnown RBP18.48■□□□□ 0.55
COL9A3-206ENST00000466532 MLIPQ5VWP3 458 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms