RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 ZNF248Q8NDW4 579 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 FAM71BQ8TC56 605 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 SAP25Q8TEE9 199 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 RGMAQ96B86 450 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 HAUS1Q96CS2 278 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 PGAP3Q96FM1 320 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 CAPZA3Q96KX2 299 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 ZNF578Q96N58 590 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 SLITRK1Q96PX8 696 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 OSBPL9Q96SU4 736 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 HEMGNQ9BXL5 484 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 SLC29A3Q9BZD2 475 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 TSGA10Q9BZW7 698 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 TINAGL1Q9GZM7 467 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 MRPL47Q9HD33 250 aaKnown RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 TM9SF3Q9HD45 589 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 PCDH12Q9NPG4 1184 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 SERHLQ9NQF3 203 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 COMMD8Q9NX08 183 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 ARHGEF38Q9NXL2 777 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 CLIC5Q9NZA1 410 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 MPP6Q9NZW5 540 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 CWC15Q9P013 229 aaKnown RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 THAP10Q9P2Z0 257 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 ZNF212Q9UDV6 495 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 AGO1Q9UL18 857 aaKnown RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 SLC27A6Q9Y2P4 619 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 AHCTF1Q8WYP5 2266 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 UBR5O95071 2799 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-204ENST00000463622 TNRC6BQ9UPQ9 1833 aaKnown RBP3.63□□□□□ -1.83
SCFD1-204ENST00000463622 DENND4CQ5VZ89 1909 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 PTPRBP23467 1997 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 hCG_1818297A0A087WSY0 165 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 LRRD1A4D1F6 860 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 CLEC18AA5D8T8 446 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 WIPF3A6NGB9 483 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 PPM1DO15297 605 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 TRIAP1O43715 76 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 MFSD11O43934 449 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 KIF5CO60282 957 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 SNUPNO95149 360 aaKnown RBP3.63□□□□□ -1.83
SCFD1-204ENST00000463622 RALAP11233 206 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 GP1BBP13224 206 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 TYRP14679 529 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 KDELR1P24390 212 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 PCK1P35558 622 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 ATP5C1P36542 298 aaKnown RBP3.63□□□□□ -1.83
SCFD1-204ENST00000463622 CDKN2BP42772 138 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 RECQLP46063 649 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-204ENST00000463622 RXRGP48443 463 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 TUBP50607 506 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 COPAP53621 1224 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 TMPRSS3P57727 454 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 ERVPABLB-1P60509 514 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 RPS24P62847 133 aaKnown RBP3.63□□□□□ -1.83
SCFD1-204ENST00000463622 DYNLT1P63172 113 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 PIGHQ14442 188 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-204ENST00000463622 TAZQ16635 292 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 FAM153CQ494X1 144 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 CCDC157Q569K6 752 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 ARHGAP40Q5TG30 622 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 NCBP2-AS2Q69YL0 99 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 FBXL22Q6P050 247 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 TTC27Q6P3X3 843 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 CLEC18BQ6UXF7 455 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 DENND1CQ8IV53 801 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 KATNAL2Q8IYT4 538 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.63□□□□□ -1.83
SCFD1-204ENST00000463622 RNF10Q8N5U6 811 aaKnown RBP3.63□□□□□ -1.83
SCFD1-204ENST00000463622 PLD5Q8N7P1 536 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 EXD3Q8N9H8 876 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 GLIS1Q8NBF1 620 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 CLEC18CQ8NCF0 446 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 MSANTD4Q8NCY6 345 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 FAM46DQ8NEK8 389 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 TRIM58Q8NG06 486 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 RNF139Q8WU17 664 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 ATG4AQ8WYN0 398 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 OVCA2Q8WZ82 227 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 FKBP10Q96AY3 582 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 FAF2Q96CS3 445 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 SIPA1Q96FS4 1042 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 CNDP2Q96KP4 475 aaKnown RBP3.63□□□□□ -1.83
SCFD1-204ENST00000463622 CSPG4P5Q96PW8 444 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 NAPGQ99747 312 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-204ENST00000463622 CNPPD1Q9BV87 410 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 DPH1Q9BZG8 443 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 SIK2Q9H0K1 926 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 MRPL46Q9H2W6 279 aaKnown RBP3.63□□□□□ -1.83
SCFD1-204ENST00000463622 DHX35Q9H5Z1 703 aaKnown RBP3.63□□□□□ -1.83
SCFD1-204ENST00000463622 C6orf106Q9H6K1 298 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-204ENST00000463622 GPR35Q9HC97 309 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 DNAJC17Q9NVM6 304 aaKnown RBP3.63□□□□□ -1.83
SCFD1-204ENST00000463622 PLK2Q9NYY3 685 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 ANKMY1Q9P2S6 941 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 AMFRQ9UKV5 643 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 VANGL2Q9ULK5 521 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 STAP1Q9ULZ2 295 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 SNX12Q9UMY4 172 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms