RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 MPLP40238 635 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 FOLH1Q04609 750 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 BNIP2Q12982 314 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 PDK3Q15120 406 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 PCBP2Q15366 365 aaKnown RBP eCLIP9.71□□□□□ -0.86
PTPRD-207ENST00000463477 FAM46CQ5VWP2 391 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 LYPLAL1Q5VWZ2 237 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 LYSMD4Q5XG99 296 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 METTL2BQ6P1Q9 378 aaKnown RBP9.71□□□□□ -0.86
PTPRD-207ENST00000463477 BLOC1S3Q6QNY0 202 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 UGT2A3Q6UWM9 527 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 LINGO4Q6UY18 593 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 THADAQ6YHU6 1953 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 RNF165Q6ZSG1 346 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 DSG4Q86SJ6 1040 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 SPATA24Q86W54 205 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 SYT12Q8IV01 421 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 AQP12AQ8IXF9 295 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 LILRA2Q8N149 483 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 PCDH20Q8N6Y1 951 aaKnown RBP9.71□□□□□ -0.86
PTPRD-207ENST00000463477 OR2A12Q8NGT7 310 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 TRPC4APQ8TEL6 797 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 OR8D1Q8WZ84 308 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 EXT2Q93063 718 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 EXOC2Q96KP1 924 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 EFHD1Q9BUP0 239 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 BRINP2Q9C0B6 783 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 BTBD1Q9H0C5 482 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 EPB41L1Q9H4G0 881 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 SGK2Q9HBY8 427 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 SLC52A3Q9NQ40 469 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 ARMC1Q9NVT9 282 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 GID8Q9NWU2 228 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 FBXL12Q9NXK8 326 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 PACSIN3Q9UKS6 424 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 PKP3Q9Y446 797 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 ZNF711Q9Y462 761 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 AP4S1Q9Y587 144 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 GPR45Q9Y5Y3 372 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 CEP250Q9BV73 2442 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 TRBV5-4A0A0C4DH59 114 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 NPEPPSL1A6NEC2 478 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 CDC7O00311 574 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 BTN3A1O00481 513 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 PRMT5O14744 637 aaPredicted RBP9.7□□□□□ -0.86
PTPRD-207ENST00000463477 MID1O15344 667 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 HTRA2O43464 458 aaPredicted RBP9.7□□□□□ -0.86
PTPRD-207ENST00000463477 SOCS5O75159 536 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 PGLSO95336 258 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 STAMBPO95630 424 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 NPPAP01160 153 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 FESP07332 822 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 TSPAN8P19075 237 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 ACSL1P33121 698 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 CLCN7P51798 805 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 CHN2P52757 468 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 FOXA1P55317 472 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 RHOAP61586 193 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 LRRC36Q1X8D7 754 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 KIF19Q2TAC6 998 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 PDCD4Q53EL6 469 aaKnown RBP9.7□□□□□ -0.86
PTPRD-207ENST00000463477 C6orf10Q5SRN2 563 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 PEAR1Q5VY43 1037 aaPredicted RBP9.7□□□□□ -0.86
PTPRD-207ENST00000463477 Q6ZVU0 165 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 ADAMTSL2Q86TH1 951 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 RETREG3Q86VR2 466 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 GPSM1Q86YR5 675 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 SPNS2Q8IVW8 549 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 KIAA2013Q8IYS2 634 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 TMIEQ8NEW7 156 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 OR9I1Q8NGQ6 314 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 PIH1D2Q8WWB5 315 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 DNASE2BQ8WZ79 361 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 FAM131CQ96AQ9 280 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 TUBGCP3Q96CW5 907 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 LINGO1Q96FE5 620 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 NSUN5Q96P11 429 aaKnown RBP9.7□□□□□ -0.86
PTPRD-207ENST00000463477 PKP2Q99959 881 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 GPR174Q9BXC1 333 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 TRIM54Q9BYV2 358 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 TRIM15Q9C019 465 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 COPS7BQ9H9Q2 264 aaPredicted RBP9.7□□□□□ -0.86
PTPRD-207ENST00000463477 TMEM74BQ9NUR3 256 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 RIC8BQ9NVN3 520 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 AIG1Q9NVV5 245 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 ZIM2Q9NZV7 527 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 NDUFA13Q9P0J0 144 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 MAP10Q9P2G4 905 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 PILRBQ9UKJ0 227 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 IKZF3Q9UKT9 509 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 FZD4Q9ULV1 537 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 TNPO3Q9Y5L0 923 aaKnown RBP9.7□□□□□ -0.86
PTPRD-207ENST00000463477 ST14Q9Y5Y6 855 aa9.7□□□□□ -0.86
PTPRD-207ENST00000463477 ZFC3H1O60293 1989 aaKnown RBP9.7□□□□□ -0.86
PTPRD-207ENST00000463477 SPTBN4Q9H254 2564 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 ATP6AP2A0A1C7CYW4 349 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 A0A1W2PP18 115 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 CAPN8A6NHC0 703 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 LRRC14BA6NHZ5 514 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 EIF4E1BA6NMX2 242 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms