RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 ZFP36L2P47974 494 aaKnown RBP12.19□□□□□ -0.46
HDAC4-208ENST00000463007 CLK1P49759 484 aaKnown RBP12.19□□□□□ -0.46
HDAC4-208ENST00000463007 EMX2Q04743 252 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 EPS8Q12929 822 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 NPTX1Q15818 432 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 SOWAHCQ53LP3 525 aaPredicted RBP12.19□□□□□ -0.46
HDAC4-208ENST00000463007 CLDN19Q8N6F1 224 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 POC5Q8NA72 575 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 OR4F6Q8NGB9 312 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 OR6K2Q8NGY2 324 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 MBOAT4Q96T53 435 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 TSEN34Q9BSV6 310 aaKnown RBP12.19□□□□□ -0.46
HDAC4-208ENST00000463007 NSUN3Q9H649 340 aaKnown RBP12.19□□□□□ -0.46
HDAC4-208ENST00000463007 TMA7Q9Y2S6 64 aaKnown RBP12.19□□□□□ -0.46
HDAC4-208ENST00000463007 ZNF451Q9Y4E5 1061 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 SLC12A8A0AV02 714 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 KRT87PA6NCN2 255 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 ZNF99A8MXY4 864 aaPredicted RBP12.19□□□□□ -0.46
HDAC4-208ENST00000463007 BCKDKO14874 412 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 KERAO60938 352 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 RPP40O75818 363 aaKnown RBP12.19□□□□□ -0.46
HDAC4-208ENST00000463007 RECQL5O94762 991 aaPredicted RBP12.19□□□□□ -0.46
HDAC4-208ENST00000463007 LCKP06239 509 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 HSMCR30P0CW71 290 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 UROSP10746 265 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 BMP1P13497 986 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 AQP1P29972 269 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 RGRP47804 291 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 OR1G1P47890 313 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 EEFSECP57772 596 aaKnown RBP12.19□□□□□ -0.46
HDAC4-208ENST00000463007 IL10RBQ08334 325 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 TWF1Q12792 350 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 LINGO4Q6UY18 593 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 DLEU7Q6UYE1 221 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 MBOAT1Q6ZNC8 495 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 Q6ZPB1 254 aaPredicted RBP12.19□□□□□ -0.46
HDAC4-208ENST00000463007 LRRC8DQ7L1W4 858 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 RNF180Q86T96 592 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 BPIFB1Q8TDL5 484 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 KIAA1191Q96A73 305 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 NSMCE3Q96MG7 304 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 ZNF583Q96ND8 569 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 TSSK3Q96PN8 268 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 MAGEL2Q9UJ55 1249 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 PCTPQ9UKL6 214 aa12.19□□□□□ -0.46
HDAC4-208ENST00000463007 FAM32AQ9Y421 112 aaKnown RBP12.19□□□□□ -0.46
HDAC4-208ENST00000463007 TET1Q8NFU7 2136 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 A0A1W2PQ45 241 aaPredicted RBP12.18□□□□□ -0.46
HDAC4-208ENST00000463007 A0A1W2PQY0 241 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 FAM234BA2RU67 622 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 H0Y626 953 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 PRMT5O14744 637 aaPredicted RBP12.18□□□□□ -0.46
HDAC4-208ENST00000463007 FKBP9O95302 570 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 PGLSO95336 258 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 TRIM16O95361 564 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 ENO2P09104 434 aaPredicted RBP12.18□□□□□ -0.46
HDAC4-208ENST00000463007 GSTM2P28161 218 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 SERPINB1P30740 379 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 CPSF6Q16630 551 aaKnown RBP eCLIP12.18□□□□□ -0.46
HDAC4-208ENST00000463007 FKBP9P1Q75LS8 142 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 PROSER1Q86XN7 944 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 TRIB3Q96RU7 358 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 TTLL2Q9BWV7 592 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 CFHR5Q9BXR6 569 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 SYTL2Q9HCH5 934 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 OLA1Q9NTK5 396 aaKnown RBP12.18□□□□□ -0.46
HDAC4-208ENST00000463007 TMEM9Q9P0T7 183 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 A8MV72 311 aaPredicted RBP12.18□□□□□ -0.46
HDAC4-208ENST00000463007 H3BNC9 293 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 ALDH1A1P00352 501 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 DNTTP04053 509 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 SERPINF2P08697 491 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 UMPSP11172 480 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 HTR1EP28566 365 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 NEK2P51955 445 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 GPR17Q13304 367 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 TP53BP2Q13625 1128 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 CTF1Q16619 201 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 PARP15Q460N3 678 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 EID3Q8N140 333 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 PDPRQ8NCN5 879 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 NETO1Q8TDF5 533 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 GIPC2Q8TF65 315 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 OR52E6Q96RD3 313 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 RNF167Q9H6Y7 350 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 IPPKQ9H8X2 491 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 HCSTQ9UBK5 93 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 SCN5AQ14524 2016 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 SOBPA7XYQ1 873 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 H0YAE9 185 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 CBX4O00257 560 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 CXCR6O00574 342 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 BNIP3LO60238 219 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 PRAMEF11O60813 436 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 JRKO75564 520 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 PABPC1P11940 636 aaKnown RBP12.18□□□□□ -0.46
HDAC4-208ENST00000463007 CTPS1P17812 591 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 ATF6P18850 670 aa12.18□□□□□ -0.46
HDAC4-208ENST00000463007 HOXD9P28356 352 aaPredicted RBP12.18□□□□□ -0.46
HDAC4-208ENST00000463007 SUOXP51687 545 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms