RNA–Protein interactions for RNA: ENST00000460758.1

SHISA5-211, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,297 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-211ENST00000460758 CTBP1Q13363 440 aa12.5□□□□□ -0.41
SHISA5-211ENST00000460758 MANEAQ5SRI9 462 aa12.5□□□□□ -0.41
SHISA5-211ENST00000460758 EMBQ6PCB8 327 aa12.5□□□□□ -0.41
SHISA5-211ENST00000460758 PACS1Q6VY07 963 aa12.5□□□□□ -0.41
SHISA5-211ENST00000460758 CYS1Q717R9 158 aa12.5□□□□□ -0.41
SHISA5-211ENST00000460758 TRMT10CQ7L0Y3 403 aaKnown RBP12.5□□□□□ -0.41
SHISA5-211ENST00000460758 PLXDC1Q8IUK5 500 aa12.5□□□□□ -0.41
SHISA5-211ENST00000460758 LILRA3Q8N6C8 439 aaPredicted RBP12.5□□□□□ -0.41
SHISA5-211ENST00000460758 C2CD4AQ8NCU7 369 aaPredicted RBP12.5□□□□□ -0.41
SHISA5-211ENST00000460758 SPDYE1Q8NFV5 336 aaPredicted RBP12.5□□□□□ -0.41
SHISA5-211ENST00000460758 GABPB2Q8TAK5 448 aaPredicted RBP12.5□□□□□ -0.41
SHISA5-211ENST00000460758 SLC39A7Q92504 469 aa12.5□□□□□ -0.41
SHISA5-211ENST00000460758 DCUN1D1Q96GG9 259 aa12.5□□□□□ -0.41
SHISA5-211ENST00000460758 RMDN2Q96LZ7 410 aa12.5□□□□□ -0.41
SHISA5-211ENST00000460758 INSM2Q96T92 566 aaPredicted RBP12.5□□□□□ -0.41
SHISA5-211ENST00000460758 TCF12Q99081 682 aa12.5□□□□□ -0.41
SHISA5-211ENST00000460758 WWP1Q9H0M0 922 aa12.5□□□□□ -0.41
SHISA5-211ENST00000460758 APMAPQ9HDC9 416 aa12.5□□□□□ -0.41
SHISA5-211ENST00000460758 IMP3Q9NV31 184 aaKnown RBP12.5□□□□□ -0.41
SHISA5-211ENST00000460758 ZFATQ9P243 1243 aa12.5□□□□□ -0.41
SHISA5-211ENST00000460758 FBXO5Q9UKT4 447 aa12.5□□□□□ -0.41
SHISA5-211ENST00000460758 CFAP20Q9Y6A4 193 aaKnown RBP12.5□□□□□ -0.41
SHISA5-211ENST00000460758 KALRNO60229 2985 aa12.5□□□□□ -0.41
SHISA5-211ENST00000460758 SMG1Q96Q15 3661 aaKnown RBP12.49□□□□□ -0.41
SHISA5-211ENST00000460758 SNRNP200O75643 2136 aaKnown RBP12.49□□□□□ -0.41
SHISA5-211ENST00000460758 FAM159BA6NKW6 160 aa12.49□□□□□ -0.41
SHISA5-211ENST00000460758 PFDN6O15212 129 aa12.49□□□□□ -0.41
SHISA5-211ENST00000460758 RIPK2O43353 540 aa12.49□□□□□ -0.41
SHISA5-211ENST00000460758 KIF1CO43896 1103 aaKnown RBP12.49□□□□□ -0.41
SHISA5-211ENST00000460758 NDUFS3O75489 264 aa12.49□□□□□ -0.41
SHISA5-211ENST00000460758 S1PR4O95977 384 aa12.49□□□□□ -0.41
SHISA5-211ENST00000460758 ATP1B2P14415 290 aaPredicted RBP12.49□□□□□ -0.41
SHISA5-211ENST00000460758 NSG1P42857 185 aa12.49□□□□□ -0.41
SHISA5-211ENST00000460758 MPP1Q00013 466 aa12.49□□□□□ -0.41
SHISA5-211ENST00000460758 COL9A2Q14055 689 aaPredicted RBP12.49□□□□□ -0.41
SHISA5-211ENST00000460758 ZNF658BQ4V348 819 aaPredicted RBP12.49□□□□□ -0.41
SHISA5-211ENST00000460758 ZNF789Q5FWF6 425 aa12.49□□□□□ -0.41
SHISA5-211ENST00000460758 DCAF12Q5T6F0 453 aa12.49□□□□□ -0.41
SHISA5-211ENST00000460758 RNF187Q5TA31 235 aaPredicted RBP12.49□□□□□ -0.41
SHISA5-211ENST00000460758 KIAA0408Q6ZU52 694 aa12.49□□□□□ -0.41
SHISA5-211ENST00000460758 PRSS42Q7Z5A4 293 aa12.49□□□□□ -0.41
SHISA5-211ENST00000460758 MTERF4Q7Z6M4 381 aaKnown RBP12.49□□□□□ -0.41
SHISA5-211ENST00000460758 LPGAT1Q92604 370 aa12.49□□□□□ -0.41
SHISA5-211ENST00000460758 CDKL2Q92772 493 aa12.49□□□□□ -0.41
SHISA5-211ENST00000460758 NKD1Q969G9 470 aa12.49□□□□□ -0.41
SHISA5-211ENST00000460758 WBP1Q96G27 269 aa12.49□□□□□ -0.41
SHISA5-211ENST00000460758 C12orf66Q96MD2 445 aa12.49□□□□□ -0.41
SHISA5-211ENST00000460758 FUT8Q9BYC5 575 aa12.49□□□□□ -0.41
SHISA5-211ENST00000460758 ASPSCR1Q9BZE9 553 aa12.49□□□□□ -0.41
SHISA5-211ENST00000460758 SPRY4Q9C004 299 aa12.49□□□□□ -0.41
SHISA5-211ENST00000460758 ZNF768Q9H5H4 540 aaKnown RBP12.49□□□□□ -0.41
SHISA5-211ENST00000460758 FBXO8Q9NRD0 319 aa12.49□□□□□ -0.41
SHISA5-211ENST00000460758 FBXO6Q9NRD1 293 aaPredicted RBP12.49□□□□□ -0.41
SHISA5-211ENST00000460758 INTS10Q9NVR2 710 aaKnown RBP12.49□□□□□ -0.41
SHISA5-211ENST00000460758 PCDHB11Q9Y5F2 797 aa12.49□□□□□ -0.41
SHISA5-211ENST00000460758 PCDHGA4Q9Y5G9 962 aa12.49□□□□□ -0.41
SHISA5-211ENST00000460758 PRSS21Q9Y6M0 314 aa12.49□□□□□ -0.41
SHISA5-211ENST00000460758 A0A087WUV0 522 aaPredicted RBP12.48□□□□□ -0.41
SHISA5-211ENST00000460758 UBA6A0AVT1 1052 aaPredicted RBP12.48□□□□□ -0.41
SHISA5-211ENST00000460758 CXorf49A8MYA2 514 aaPredicted RBP12.48□□□□□ -0.41
SHISA5-211ENST00000460758 PRMT5O14744 637 aaPredicted RBP12.48□□□□□ -0.41
SHISA5-211ENST00000460758 TOX3O15405 576 aaPredicted RBP12.48□□□□□ -0.41
SHISA5-211ENST00000460758 PIAS1O75925 651 aa12.48□□□□□ -0.41
SHISA5-211ENST00000460758 AP2A2O94973 939 aa12.48□□□□□ -0.41
SHISA5-211ENST00000460758 ABHD2P08910 425 aa12.48□□□□□ -0.41
SHISA5-211ENST00000460758 SLC35G4P0C7Q5 338 aa12.48□□□□□ -0.41
SHISA5-211ENST00000460758 RPS3P23396 243 aaKnown RBP eCLIP12.48□□□□□ -0.414e-6■■■■□ 22.8
SHISA5-211ENST00000460758 SEPHS1P49903 392 aa12.48□□□□□ -0.41
SHISA5-211ENST00000460758 EIF3BP55884 814 aaKnown RBP12.48□□□□□ -0.41
SHISA5-211ENST00000460758 SH3BP2P78314 561 aa12.48□□□□□ -0.41
SHISA5-211ENST00000460758 EFTUD2Q15029 972 aaKnown RBP eCLIP12.48□□□□□ -0.41
SHISA5-211ENST00000460758 KBTBD12Q3ZCT8 623 aa12.48□□□□□ -0.41
SHISA5-211ENST00000460758 IRGCQ6NXR0 463 aa12.48□□□□□ -0.41
SHISA5-211ENST00000460758 FAM92BQ6ZTR7 304 aa12.48□□□□□ -0.41
SHISA5-211ENST00000460758 GALNT7Q86SF2 657 aa12.48□□□□□ -0.41
SHISA5-211ENST00000460758 UHMK1Q8TAS1 419 aaKnown RBP12.48□□□□□ -0.41
SHISA5-211ENST00000460758 HM13Q8TCT9 377 aa12.48□□□□□ -0.41
SHISA5-211ENST00000460758 UBLCP1Q8WVY7 318 aaPredicted RBP12.48□□□□□ -0.41
SHISA5-211ENST00000460758 CAVIN3Q969G5 261 aa12.48□□□□□ -0.41
SHISA5-211ENST00000460758 TEFMQ96QE5 360 aaKnown RBP12.48□□□□□ -0.41
SHISA5-211ENST00000460758 RAB33BQ9H082 229 aa12.48□□□□□ -0.41
SHISA5-211ENST00000460758 P2RY12Q9H244 342 aa12.48□□□□□ -0.41
SHISA5-211ENST00000460758 EPB41L4BQ9H329 900 aa12.48□□□□□ -0.41
SHISA5-211ENST00000460758 ACSS3Q9H6R3 686 aa12.48□□□□□ -0.41
SHISA5-211ENST00000460758 NSMCE4AQ9NXX6 385 aa12.48□□□□□ -0.41
SHISA5-211ENST00000460758 EPHA6Q9UF33 1036 aa12.48□□□□□ -0.41
SHISA5-211ENST00000460758 PILRAQ9UKJ1 303 aa12.48□□□□□ -0.41
SHISA5-211ENST00000460758 ACSL5Q9ULC5 683 aa12.48□□□□□ -0.41
SHISA5-211ENST00000460758 VPS9D1Q9Y2B5 631 aa12.48□□□□□ -0.41
SHISA5-211ENST00000460758 PSAT1Q9Y617 370 aa12.48□□□□□ -0.41
SHISA5-211ENST00000460758 ATP8B1O43520 1251 aa12.47□□□□□ -0.41
SHISA5-211ENST00000460758 RAD1O60671 282 aa12.47□□□□□ -0.41
SHISA5-211ENST00000460758 RASSF9O75901 435 aa12.47□□□□□ -0.41
SHISA5-211ENST00000460758 HAUS5O94927 633 aa12.47□□□□□ -0.41
SHISA5-211ENST00000460758 LIFP15018 202 aa12.47□□□□□ -0.41
SHISA5-211ENST00000460758 GABRB3P28472 473 aa12.47□□□□□ -0.41
SHISA5-211ENST00000460758 FMO4P31512 558 aa12.47□□□□□ -0.41
SHISA5-211ENST00000460758 ATP1A2P50993 1020 aa12.47□□□□□ -0.41
SHISA5-211ENST00000460758 NAB1Q13506 487 aa12.47□□□□□ -0.41
SHISA5-211ENST00000460758 PLCL1Q15111 1095 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms