RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 DLX5P56178 289 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 MAT1AQ00266 395 aaKnown RBP3.17□□□□□ -1.9
RFC4-211ENST00000460408 ACSM1Q08AH1 577 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 ARL16Q0P5N6 197 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 TFCP2Q12800 502 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 ZRSR1Q15695 479 aaKnown RBP3.17□□□□□ -1.9
RFC4-211ENST00000460408 MDH1BQ5I0G3 518 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 PDSS1Q5T2R2 415 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 PLA2G4FQ68DD2 849 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 ANO5Q75V66 913 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 TMPRSS11BQ86T26 416 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 ARHGAP24Q8N264 748 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 CAMKVQ8NCB2 501 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 SLC24A4Q8NFF2 622 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 OR13J1Q8NGT2 312 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 OLIG1Q8TAK6 271 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 FGFBP3Q8TAT2 258 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 ZNF473Q8WTR7 871 aaKnown RBP3.17□□□□□ -1.9
RFC4-211ENST00000460408 CD101Q93033 1021 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 WBP1Q96G27 269 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 SGK494Q96LW2 274 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 ZNF583Q96ND8 569 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 SEPHS2Q99611 448 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 RETREG1Q9H6L5 497 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 ZFP57Q9NU63 452 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 DONSONQ9NYP3 566 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 KCNG2Q9UJ96 466 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 MTUS1Q9ULD2 1270 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 PADI2Q9Y2J8 665 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 PCDH11YQ9BZA8 1340 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 A0A1W2PRQ8 180 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 NEMP2A6NFY4 417 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 TSPY2A6NKD2 308 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 E9PI62 339 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 GAPDHSO14556 408 aaPredicted RBP3.16□□□□□ -1.9
RFC4-211ENST00000460408 MEIS2O14770 477 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 BUB3O43684 328 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 DIAPH2O60879 1101 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 KRT36O76013 467 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 IGHV2-70P01814 119 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 OR52Z1P0C646 297 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 TSPY3P0CV98 308 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 TSPY8P0CW00 308 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 IFNAR1P17181 557 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 AMD1P17707 334 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 ERCC2P18074 760 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 SLC6A6P31641 620 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 DCTP40126 519 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 NR2C2P49116 596 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 TERF1P54274 439 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 TSPY1Q01534 308 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 ROR1Q01973 937 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 RBPJQ06330 500 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 PPIGQ13427 754 aaKnown RBP eCLIP3.16□□□□□ -1.9
RFC4-211ENST00000460408 ZNF273Q14593 569 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 TNIP1Q15025 636 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 ZNF672Q499Z4 452 aaPredicted RBP3.16□□□□□ -1.9
RFC4-211ENST00000460408 SYT14P1Q58G82 188 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 FAM76BQ5HYJ3 339 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 CCNYL2Q5T2Q4 361 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 TRAT1Q6PIZ9 186 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 ERN2Q76MJ5 926 aaKnown RBP3.16□□□□□ -1.9
RFC4-211ENST00000460408 CUZD1Q86UP6 607 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 VSIG1Q86XK7 387 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 FOXP4Q8IVH2 680 aaPredicted RBP3.16□□□□□ -1.9
RFC4-211ENST00000460408 NPEPL1Q8NDH3 523 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 OR2T12Q8NG77 320 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 OR13A1Q8NGR1 328 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 KIF18AQ8NI77 898 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 ROBO4Q8WZ75 1007 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 DHX58Q96C10 678 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 SLC47A1Q96FL8 570 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 ST6GAL2Q96JF0 529 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 SFXN2Q96NB2 322 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 FEVQ99581 238 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 CPNE1Q99829 537 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 FZD8Q9H461 694 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 SH3GLB2Q9NR46 395 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 SERINC1Q9NRX5 453 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 SLC38A7Q9NVC3 462 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 B3GAT1Q9P2W7 334 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 RNF150Q9ULK6 438 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 NOTCH3Q9UM47 2321 aa3.16□□□□□ -1.9
RFC4-211ENST00000460408 ZNF608Q9ULD9 1512 aaPredicted RBP3.15□□□□□ -1.9
RFC4-211ENST00000460408 A0A1W2PRB8 838 aa3.15□□□□□ -1.91
RFC4-211ENST00000460408 XPNPEP2O43895 674 aa3.15□□□□□ -1.91
RFC4-211ENST00000460408 RNASEH1O60930 286 aaKnown RBP3.15□□□□□ -1.91
RFC4-211ENST00000460408 IGKV3-20P01619 116 aa3.15□□□□□ -1.91
RFC4-211ENST00000460408 CETPP11597 493 aa3.15□□□□□ -1.91
RFC4-211ENST00000460408 SCG2P13521 617 aa3.15□□□□□ -1.91
RFC4-211ENST00000460408 PAX1P15863 534 aa3.15□□□□□ -1.91
RFC4-211ENST00000460408 CD22P20273 847 aa3.15□□□□□ -1.91
RFC4-211ENST00000460408 MSH3P20585 1137 aa3.15□□□□□ -1.91
RFC4-211ENST00000460408 PTPN3P26045 913 aa3.15□□□□□ -1.91
RFC4-211ENST00000460408 EPHA2P29317 976 aa3.15□□□□□ -1.91
RFC4-211ENST00000460408 HOXC8P31273 242 aa3.15□□□□□ -1.91
RFC4-211ENST00000460408 LHX1P48742 406 aa3.15□□□□□ -1.91
RFC4-211ENST00000460408 NPY4RP50391 375 aa3.15□□□□□ -1.91
RFC4-211ENST00000460408 ASCL1P50553 236 aa3.15□□□□□ -1.91
RFC4-211ENST00000460408 B3GALT5-AS1P59052 145 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms