RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 JAK1P23458 1154 aa17.74■□□□□ 0.43
HPS3-202ENST00000460120 TACR1P25103 407 aa17.74■□□□□ 0.43
HPS3-202ENST00000460120 TPD52P55327 224 aaPredicted RBP17.74■□□□□ 0.43
HPS3-202ENST00000460120 B4GALNT1Q00973 533 aa17.74■□□□□ 0.43
HPS3-202ENST00000460120 TLE2Q04725 743 aa17.74■□□□□ 0.43
HPS3-202ENST00000460120 KIAA0040Q15053 153 aa17.74■□□□□ 0.43
HPS3-202ENST00000460120 DEFB115Q30KQ5 88 aa17.74■□□□□ 0.43
HPS3-202ENST00000460120 TRIM60Q495X7 471 aa17.74■□□□□ 0.43
HPS3-202ENST00000460120 TMEM26Q6ZUK4 368 aa17.74■□□□□ 0.43
HPS3-202ENST00000460120 BPIFB1Q8TDL5 484 aa17.74■□□□□ 0.43
HPS3-202ENST00000460120 EGLN2Q96KS0 407 aa17.74■□□□□ 0.43
HPS3-202ENST00000460120 NPLQ9BXD5 320 aaPredicted RBP17.74■□□□□ 0.43
HPS3-202ENST00000460120 MUC13Q9H3R2 512 aa17.74■□□□□ 0.43
HPS3-202ENST00000460120 PARVBQ9HBI1 364 aa17.74■□□□□ 0.43
HPS3-202ENST00000460120 STOML2Q9UJZ1 356 aa17.74■□□□□ 0.43
HPS3-202ENST00000460120 C5orf42Q9H799 3197 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 WDR47O94967 919 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 BMP10O95393 424 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 EFEMP2O95967 443 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 BCKDHAP12694 445 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 SRCP12931 536 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 IL7RP16871 459 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 ARSFP54793 590 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 NAA20P61599 178 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 PIGFQ07326 219 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 DDX39BQ13838 428 aaKnown RBP17.73■□□□□ 0.43
HPS3-202ENST00000460120 IRAK1BP1Q5VVH5 260 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 SPESP1Q6UW49 350 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 RIMKLAQ8IXN7 391 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 CHST14Q8NCH0 376 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 MRPS31Q92665 395 aaKnown RBP17.73■□□□□ 0.43
HPS3-202ENST00000460120 FOXJ1Q92949 421 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 C12orf43Q96C57 262 aaKnown RBP17.73■□□□□ 0.43
HPS3-202ENST00000460120 COPS8Q99627 209 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 CORO1BQ9BR76 489 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 PDE10AQ9Y233 779 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 TRIM17Q9Y577 477 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 PCDHGA11Q9Y5H2 935 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 AREL1O15033 823 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 RPS3P23396 243 aaKnown RBP eCLIP17.73■□□□□ 0.43
HPS3-202ENST00000460120 GALK1P51570 392 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 IL1RL1Q01638 556 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 PTSQ03393 145 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 ZXDCQ2QGD7 858 aaPredicted RBP17.73■□□□□ 0.43
HPS3-202ENST00000460120 KCTD21Q4G0X4 260 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 GRAMD4Q6IC98 578 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 Q6ZVU0 165 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 PATL1Q86TB9 770 aaKnown RBP17.73■□□□□ 0.43
HPS3-202ENST00000460120 SCAMP4Q969E2 229 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 SLC47A1Q96FL8 570 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 CXorf21Q9HAI6 301 aa17.73■□□□□ 0.43
HPS3-202ENST00000460120 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.72■□□□□ 0.43
HPS3-202ENST00000460120 UPK1AO00322 258 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 DEAF1O75398 565 aaPredicted RBP17.72■□□□□ 0.43
HPS3-202ENST00000460120 CLDN9O95484 217 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 ANXA5P08758 320 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 RAP2AP10114 183 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 WEE1P30291 646 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 POLR2IP36954 125 aaKnown RBP17.72■□□□□ 0.43
HPS3-202ENST00000460120 PHC1P78364 1004 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 BORAQ6PGQ7 559 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 DPY19L3Q6ZPD9 716 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 SLC39A11Q8N1S5 342 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 SLAIN1Q8ND83 568 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 PAPD5Q8NDF8 572 aaKnown RBP17.72■□□□□ 0.43
HPS3-202ENST00000460120 ZNF296Q8WUU4 475 aaPredicted RBP17.72■□□□□ 0.43
HPS3-202ENST00000460120 HTATIP2Q9BUP3 242 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 ELOVL6Q9H5J4 265 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 PKD2L2Q9NZM6 624 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 IFT80Q9P2H3 777 aaPredicted RBP17.72■□□□□ 0.43
HPS3-202ENST00000460120 ATP11BQ9Y2G3 1177 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 PCDHB14Q9Y5E9 798 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 H0Y858 1186 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 SLC28A1O00337 649 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 EPORP19235 508 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 HLA-FP30511 346 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 CDKN2CP42773 168 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 TUBA4AP68366 448 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 RAB33AQ14088 237 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 RAB39AQ14964 217 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 TTLL9Q3SXZ7 439 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 GOLM1Q8NBJ4 401 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 B4GALNT2Q8NHY0 566 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 TOR3AQ9H497 397 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 MTG2Q9H4K7 406 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 HCFC1R1Q9NWW0 138 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 SLC22A14Q9Y267 594 aa17.72■□□□□ 0.43
HPS3-202ENST00000460120 OR2AG2A6NM03 316 aa17.71■□□□□ 0.43
HPS3-202ENST00000460120 G3V2T6 193 aa17.71■□□□□ 0.43
HPS3-202ENST00000460120 ARNTLO00327 626 aa17.71■□□□□ 0.43
HPS3-202ENST00000460120 CXCR6O00574 342 aa17.71■□□□□ 0.43
HPS3-202ENST00000460120 MRPL19P49406 292 aaKnown RBP17.71■□□□□ 0.43
HPS3-202ENST00000460120 MACC1Q6ZN28 852 aa17.71■□□□□ 0.43
HPS3-202ENST00000460120 ZDHHC13Q8IUH4 622 aa17.71■□□□□ 0.43
HPS3-202ENST00000460120 ZNF548Q8NEK5 533 aaPredicted RBP17.71■□□□□ 0.43
HPS3-202ENST00000460120 SLC22A17Q8WUG5 538 aa17.71■□□□□ 0.43
HPS3-202ENST00000460120 SORCS1Q8WY21 1168 aa17.71■□□□□ 0.43
HPS3-202ENST00000460120 ITCHQ96J02 903 aa17.71■□□□□ 0.43
HPS3-202ENST00000460120 APOLD1Q96LR9 279 aa17.71■□□□□ 0.43
HPS3-202ENST00000460120 C1orf109Q9NX04 203 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms