RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 PPP2CAP67775 309 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 B4GALNT1Q00973 533 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 IRF8Q02556 426 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 CSTF1Q05048 431 aaKnown RBP5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 ZNF33BQ06732 778 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 IFT88Q13099 833 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 NFE2L1Q14494 772 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 PCBP2Q15366 365 aaKnown RBP eCLIP5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 MAPRE2Q15555 327 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 OR4D1Q15615 310 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 UAP1L1Q3KQV9 507 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 PYCR3Q53H96 274 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 C10orf62Q5T681 223 aaPredicted RBP5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 ZC3H14Q6PJT7 736 aaKnown RBP5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 FRMD7Q6ZUT3 714 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 CUZD1Q86UP6 607 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 PARGQ86W56 976 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 LONP2Q86WA8 852 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 RBM12BQ8IXT5 1001 aaKnown RBP5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 ARHGAP24Q8N264 748 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 PDPRQ8NCN5 879 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 FBXO15Q8NCQ5 510 aaPredicted RBP5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 ACVR1CQ8NER5 493 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 OR9A1PQ8NGU1 263 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 METTL6Q8TCB7 284 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 TRPC4APQ8TEL6 797 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 ZFPM2Q8WW38 1151 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 RLN3Q8WXF3 142 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 FAM131CQ96AQ9 280 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 PTERQ96BW5 349 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 CCDC97Q96F63 343 aaPredicted RBP5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 THOC1Q96FV9 657 aaKnown RBP5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 HSPA12BQ96MM6 686 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 ZNF317Q96PQ6 595 aaPredicted RBP5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 ATOH8Q96SQ7 321 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 UHRF1Q96T88 793 aaPredicted RBP5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 GATA5Q9BWX5 397 aaPredicted RBP5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 TMEM120AQ9BXJ8 343 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 NUSAP1Q9BXS6 441 aaKnown RBP5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 ELOVL6Q9H5J4 265 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 C6orf106Q9H6K1 298 aaPredicted RBP5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 FZD3Q9NPG1 666 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 CCDC177Q9NQR7 707 aaPredicted RBP5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 IMP3Q9NV31 184 aaKnown RBP5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 MARCOQ9UEW3 520 aaPredicted RBP5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 ADGRE2Q9UHX3 823 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 EIF2B4Q9UI10 523 aaKnown RBP5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 ZFP69BQ9UJL9 534 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 EMCNQ9ULC0 261 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 SUFUQ9UMX1 484 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 PSMD13Q9UNM6 376 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 MAPRE3Q9UPY8 281 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 PDE10AQ9Y233 779 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 SLC17A4Q9Y2C5 497 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 TRAF6Q9Y4K3 522 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 PCDHGA11Q9Y5H2 935 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 PLXND1Q9Y4D7 1925 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 BRCA2P51587 3418 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 KIR2DS5A0A0G2JLQ3 304 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 A0A0G2JNG1 304 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 SPTY2D1-AS1A0A0U1RR47 76 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 A0A1B0GTW7 788 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 POM121BA6NF01 834 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 TMEM221A6NGB7 291 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 ANKDD1BA6NHY2 528 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 KIR2DS3K7RE56 304 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 M0R296 226 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 TLR4O00206 839 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 SLC28A1O00337 649 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 BCAT2O15382 392 aaPredicted RBP5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 YKT6O15498 198 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 SGTAO43765 313 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 KLK8O60259 260 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 UGDHO60701 494 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 SNNO75324 88 aaPredicted RBP5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 C1orf105O95561 183 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 ESRRBO95718 433 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 TOP3BO95985 862 aaKnown RBP5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 CEACAM5P06731 702 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 FGF4P08620 206 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 ALPPL2P10696 532 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 ESRRAP11474 423 aaPredicted RBP5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 JUNDP17535 347 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 AMD1P17707 334 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 CMPK1P30085 196 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 SHMT2P34897 504 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 HNF4AP41235 474 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 PREPP48147 710 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 PXNP49023 591 aaPredicted RBP5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 HK3P52790 923 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 CTSCP53634 463 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 ATXN3P54252 364 aaPredicted RBP5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 CDH13P55290 713 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 OCRLQ01968 901 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 DMPKQ09013 629 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 DLG1Q12959 904 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 NAE1Q13564 534 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 KIR2DS5Q14953 304 aa5.69□□□□□ -1.5
RNU1-88P-201ENST00000459274 KIF19Q2TAC6 998 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms