RNA–Protein interactions for RNA: ENST00000454289.7

TSFM-204, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSFM, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-204ENST00000454289 HDDC3Q8N4P3 179 aa12.75□□□□□ -0.37
TSFM-204ENST00000454289 SMRP1Q8NCR6 262 aa12.75□□□□□ -0.37
TSFM-204ENST00000454289 SERPINI1Q99574 410 aa12.75□□□□□ -0.37
TSFM-204ENST00000454289 ATG10Q9H0Y0 220 aa12.75□□□□□ -0.37
TSFM-204ENST00000454289 SLC52A3Q9NQ40 469 aa12.75□□□□□ -0.37
TSFM-204ENST00000454289 MTCH2Q9Y6C9 303 aa12.75□□□□□ -0.37
TSFM-204ENST00000454289 KCNE1BA0A087WTH5 132 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 A0A1W2PP55 124 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 NPC1O15118 1278 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 CLDN9O95484 217 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 XRCC1P18887 633 aaPredicted RBP12.74□□□□□ -0.37
TSFM-204ENST00000454289 C5AR1P21730 350 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 PFN3P60673 137 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 UFM1P61960 85 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 RPS14P62263 151 aaKnown RBP12.74□□□□□ -0.37
TSFM-204ENST00000454289 CCDC6Q16204 474 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 PDCD4Q53EL6 469 aaKnown RBP12.74□□□□□ -0.37
TSFM-204ENST00000454289 COL13A1Q5TAT6 717 aaPredicted RBP12.74□□□□□ -0.37
TSFM-204ENST00000454289 BLOC1S3Q6QNY0 202 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 LAYNQ6UX15 382 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 ADAMTSL4Q6UY14 1074 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 HACD2Q6Y1H2 254 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 RNF165Q6ZSG1 346 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 RNF148Q8N7C7 305 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 COX14Q96I36 57 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 HIC2Q96JB3 615 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 SLC29A3Q9BZD2 475 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 ACTR8Q9H981 624 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 EBF2Q9HAK2 575 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 HEBP1Q9NRV9 189 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 DNAJC11Q9NVH1 559 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 STX18Q9P2W9 335 aaKnown RBP12.74□□□□□ -0.37
TSFM-204ENST00000454289 CIDEBQ9UHD4 219 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 ZNHIT2Q9UHR6 403 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 SLC22A14Q9Y267 594 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 TMEM98Q9Y2Y6 226 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 PCYT1BQ9Y5K3 369 aaPredicted RBP12.74□□□□□ -0.37
TSFM-204ENST00000454289 COL4A2P08572 1712 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 BBIP1A8MTZ0 92 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 E7ENX8 843 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 PRAMEF4O60810 478 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 PCDH8O95206 1070 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 PCCBP05166 539 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 MAP4P27816 1152 aaKnown RBP12.74□□□□□ -0.37
TSFM-204ENST00000454289 CTHP32929 405 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 EMX2Q04743 252 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 GRIK2Q13002 908 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 GTF2H3Q13889 308 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 WSCD2Q2TBF2 565 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 AP5B1Q2VPB7 878 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 SGO1Q5FBB7 561 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 PRAMEF9Q5VWM5 478 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 ZNF776Q68DI1 518 aaPredicted RBP12.74□□□□□ -0.37
TSFM-204ENST00000454289 C8orf82Q6P1X6 216 aaPredicted RBP12.74□□□□□ -0.37
TSFM-204ENST00000454289 PNCKQ6P2M8 343 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 CRTC3Q6UUV7 619 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 CFAP206Q8IYR0 622 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 USP7Q93009 1102 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 TACO1Q9BSH4 297 aaKnown RBP12.74□□□□□ -0.37
TSFM-204ENST00000454289 MAP10Q9P2G4 905 aa12.74□□□□□ -0.37
TSFM-204ENST00000454289 ZNF490Q9ULM2 529 aaPredicted RBP12.74□□□□□ -0.37
TSFM-204ENST00000454289 H3BM21 787 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 LIN7AO14910 233 aaPredicted RBP12.73□□□□□ -0.37
TSFM-204ENST00000454289 VEGFDO43915 354 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 ULK1O75385 1050 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 EGFP01133 1207 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 CATP04040 527 aaKnown RBP12.73□□□□□ -0.37
TSFM-204ENST00000454289 IL12AP29459 219 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 MSX2P35548 267 aaPredicted RBP12.73□□□□□ -0.37
TSFM-204ENST00000454289 PTDSS1P48651 473 aaKnown RBP12.73□□□□□ -0.37
TSFM-204ENST00000454289 SESN3P58005 492 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 HMGCS1Q01581 520 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 SLC34A1Q06495 639 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 ADGRE1Q14246 886 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 NUMA1Q14980 2115 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 COL19A1Q14993 1142 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 CPSF6Q16630 551 aaKnown RBP eCLIP12.73□□□□□ -0.37
TSFM-204ENST00000454289 PLA2G4EQ3MJ16 856 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 TMEM196Q5HYL7 178 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 TRIM46Q7Z4K8 759 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 HEATR4Q86WZ0 1026 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 HIPK4Q8NE63 616 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 OR2T3Q8NH03 318 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 LINC00615Q96LM1 132 aaPredicted RBP12.73□□□□□ -0.37
TSFM-204ENST00000454289 NECTIN4Q96NY8 510 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 PKP4Q99569 1192 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 SLC6A17Q9H1V8 727 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 ADA2Q9NZK5 511 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 ZIM2Q9NZV7 527 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 STOX2Q9P2F5 926 aaPredicted RBP12.73□□□□□ -0.37
TSFM-204ENST00000454289 CROTQ9UKG9 612 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 NDUFAF1Q9Y375 327 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 POLR3HQ9Y535 204 aaPredicted RBP12.73□□□□□ -0.37
TSFM-204ENST00000454289 ASPDHA6ND91 283 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 SLC28A1O00337 649 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 RGS14O43566 566 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 SLC22A3O75751 556 aa12.73□□□□□ -0.37
TSFM-204ENST00000454289 RNASEH2AO75792 299 aaKnown RBP12.73□□□□□ -0.37
TSFM-204ENST00000454289 POP7O75817 140 aaKnown RBP12.73□□□□□ -0.37
TSFM-204ENST00000454289 NTSR1P30989 418 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms