RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 CMKLR1Q99788 373 aa27.16■■□□□ 1.94
SMARCC1-203ENST00000454240 MENTQ9BUN1 341 aa27.16■■□□□ 1.94
SMARCC1-203ENST00000454240 FUT8Q9BYC5 575 aa27.16■■□□□ 1.94
SMARCC1-203ENST00000454240 TWSG1Q9GZX9 223 aa27.16■■□□□ 1.94
SMARCC1-203ENST00000454240 KLHL3Q9UH77 587 aa27.16■■□□□ 1.94
SMARCC1-203ENST00000454240 PCDHGA8Q9Y5G5 932 aa27.16■■□□□ 1.94
SMARCC1-203ENST00000454240 CEP295Q9C0D2 2601 aa27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 FAM95CA0A1B0GW59 222 aa27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 A8MU76 341 aa27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 BTN3A3O00478 584 aa27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 TOX3O15405 576 aaPredicted RBP27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 KDM1AO60341 852 aa27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 PSIP1O75475 530 aaKnown RBP27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 MPOP05164 745 aa27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 ANKRD34CP0C6C1 535 aa27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 POLR2CP19387 275 aaPredicted RBP27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 PHBP35232 272 aa27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 GP5P40197 560 aa27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 CCNFP41002 786 aa27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 NAB1Q13506 487 aa27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 SLMAPQ14BN4 828 aa27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 IRGCQ6NXR0 463 aa27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 TTC23LQ6PF05 361 aa27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 RASGRP3Q8IV61 690 aa27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 ADGRF3Q8IZF5 1079 aa27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 FBXO39Q8N4B4 442 aa27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 PPM1NQ8N819 430 aa27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 EEF1AKMT1Q8WVE0 214 aa27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 RAD51AP1Q96B01 352 aa27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 ELMO2Q96JJ3 720 aa27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 RBBP8Q99708 897 aa27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 SEMA5BQ9P283 1151 aa27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 TXNDC16Q9P2K2 825 aa27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 PLAGL1Q9UM63 463 aa27.15■■□□□ 1.94
SMARCC1-203ENST00000454240 PMS2P1A4D2B8 440 aa27.14■■□□□ 1.94
SMARCC1-203ENST00000454240 C1QTNF9BB2RNN3 333 aa27.14■■□□□ 1.94
SMARCC1-203ENST00000454240 BTN3A1O00481 513 aa27.14■■□□□ 1.94
SMARCC1-203ENST00000454240 PLD2O14939 933 aa27.14■■□□□ 1.94
SMARCC1-203ENST00000454240 SLU7O95391 586 aaKnown RBP27.14■■□□□ 1.94
SMARCC1-203ENST00000454240 CAPNS1P04632 268 aa27.14■■□□□ 1.94
SMARCC1-203ENST00000454240 C1QTNF9P0C862 333 aa27.14■■□□□ 1.94
SMARCC1-203ENST00000454240 TUBB4BP68371 445 aa27.14■■□□□ 1.94
SMARCC1-203ENST00000454240 GABREP78334 506 aa27.14■■□□□ 1.94
SMARCC1-203ENST00000454240 PDAP1Q13442 181 aaKnown RBP27.14■■□□□ 1.94
SMARCC1-203ENST00000454240 LRRC8EQ6NSJ5 796 aa27.14■■□□□ 1.94
SMARCC1-203ENST00000454240 ARMC6Q6NXE6 501 aa27.14■■□□□ 1.94
SMARCC1-203ENST00000454240 IGF2-ASQ6U949 168 aa27.14■■□□□ 1.94
SMARCC1-203ENST00000454240 FAM92BQ6ZTR7 304 aa27.14■■□□□ 1.94
SMARCC1-203ENST00000454240 MAGEC3Q8TD91 643 aa27.14■■□□□ 1.94
SMARCC1-203ENST00000454240 ASB11Q8WXH4 323 aa27.14■■□□□ 1.94
SMARCC1-203ENST00000454240 OR6C2Q9NZP2 312 aa27.14■■□□□ 1.94
SMARCC1-203ENST00000454240 MTO1Q9Y2Z2 717 aaKnown RBP27.14■■□□□ 1.94
SMARCC1-203ENST00000454240 LOXL2Q9Y4K0 774 aa27.14■■□□□ 1.94
SMARCC1-203ENST00000454240 MATN2O00339 956 aa27.13■■□□□ 1.93
SMARCC1-203ENST00000454240 KIF1CO43896 1103 aaKnown RBP27.13■■□□□ 1.93
SMARCC1-203ENST00000454240 BDKRB1P46663 353 aa27.13■■□□□ 1.93
SMARCC1-203ENST00000454240 RGS4P49798 205 aa27.13■■□□□ 1.93
SMARCC1-203ENST00000454240 PGGT1BP53609 377 aa27.13■■□□□ 1.93
SMARCC1-203ENST00000454240 PRKAA1Q13131 559 aa27.13■■□□□ 1.93
SMARCC1-203ENST00000454240 EFTUD2Q15029 972 aaKnown RBP eCLIP27.13■■□□□ 1.932e-6■□□□□ 9.2
SMARCC1-203ENST00000454240 CCSMST1Q4G0I0 132 aa27.13■■□□□ 1.93
SMARCC1-203ENST00000454240 GRTP1Q5TC63 336 aa27.13■■□□□ 1.93
SMARCC1-203ENST00000454240 UNQ6494/PRO21346Q6UXR6 183 aa27.13■■□□□ 1.93
SMARCC1-203ENST00000454240 PRSS42Q7Z5A4 293 aa27.13■■□□□ 1.93
SMARCC1-203ENST00000454240 AGBL5Q8NDL9 886 aa27.13■■□□□ 1.93
SMARCC1-203ENST00000454240 CD180Q99467 661 aa27.13■■□□□ 1.93
SMARCC1-203ENST00000454240 ANKZF1Q9H8Y5 726 aa27.13■■□□□ 1.93
SMARCC1-203ENST00000454240 AKAP7Q9P0M2 348 aaPredicted RBP27.13■■□□□ 1.93
SMARCC1-203ENST00000454240 AK5Q9Y6K8 562 aa27.13■■□□□ 1.93
SMARCC1-203ENST00000454240 FRYQ5TBA9 3013 aa27.13■■□□□ 1.93
SMARCC1-203ENST00000454240 ADAMTS20P59510 1910 aa27.12■■□□□ 1.93
SMARCC1-203ENST00000454240 GFYI3L273 518 aa27.12■■□□□ 1.93
SMARCC1-203ENST00000454240 DXOO77932 396 aaKnown RBP27.12■■□□□ 1.93
SMARCC1-203ENST00000454240 ACSL3O95573 720 aa27.12■■□□□ 1.93
SMARCC1-203ENST00000454240 FAM153BP0C7A2 387 aa27.12■■□□□ 1.93
SMARCC1-203ENST00000454240 HGFP14210 728 aa27.12■■□□□ 1.93
SMARCC1-203ENST00000454240 TNFRSF8P28908 595 aa27.12■■□□□ 1.93
SMARCC1-203ENST00000454240 PKLRP30613 574 aa27.12■■□□□ 1.93
SMARCC1-203ENST00000454240 CSTF2P33240 577 aaKnown RBP eCLIP27.12■■□□□ 1.93
SMARCC1-203ENST00000454240 RAB28P51157 221 aa27.12■■□□□ 1.93
SMARCC1-203ENST00000454240 KPNA2P52292 529 aaKnown RBP27.12■■□□□ 1.93
SMARCC1-203ENST00000454240 TAS2R39P59534 338 aa27.12■■□□□ 1.93
SMARCC1-203ENST00000454240 FAM153CQ494X1 144 aa27.12■■□□□ 1.93
SMARCC1-203ENST00000454240 PIWIL4Q7Z3Z4 852 aaKnown RBP27.12■■□□□ 1.93
SMARCC1-203ENST00000454240 KLHL6Q8WZ60 621 aa27.12■■□□□ 1.93
SMARCC1-203ENST00000454240 CYTH2Q99418 400 aa27.12■■□□□ 1.93
SMARCC1-203ENST00000454240 GPR22Q99680 433 aa27.12■■□□□ 1.93
SMARCC1-203ENST00000454240 ACSS3Q9H6R3 686 aa27.12■■□□□ 1.93
SMARCC1-203ENST00000454240 DKK4Q9UBT3 224 aa27.12■■□□□ 1.93
SMARCC1-203ENST00000454240 CIDEBQ9UHD4 219 aa27.12■■□□□ 1.93
SMARCC1-203ENST00000454240 POMT2Q9UKY4 750 aa27.12■■□□□ 1.93
SMARCC1-203ENST00000454240 ARHGEF33A8MVX0 844 aa27.11■■□□□ 1.93
SMARCC1-203ENST00000454240 AGRPO00253 132 aa27.11■■□□□ 1.93
SMARCC1-203ENST00000454240 FAM155BO75949 473 aa27.11■■□□□ 1.93
SMARCC1-203ENST00000454240 TSPAN12O95859 305 aa27.11■■□□□ 1.93
SMARCC1-203ENST00000454240 CATP04040 527 aaKnown RBP27.11■■□□□ 1.93
SMARCC1-203ENST00000454240 SAT1P21673 171 aa27.11■■□□□ 1.93
SMARCC1-203ENST00000454240 SPRP35270 261 aaPredicted RBP27.11■■□□□ 1.93
SMARCC1-203ENST00000454240 IL2P60568 153 aa27.11■■□□□ 1.93
SMARCC1-203ENST00000454240 POU4F1Q01851 419 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms