RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 IQCF5A8MTL0 148 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 ISM1B1AKI9 464 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 J3QKU1 62 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 PGRMC1O00264 195 aaKnown RBP10.34□□□□□ -0.75
DDX39A-203ENST00000454233 TERTO14746 1132 aaKnown RBP10.34□□□□□ -0.75
DDX39A-203ENST00000454233 KPNA5O15131 536 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 SLC28A2O43868 658 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 GPC4O75487 556 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 CREG1O75629 220 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 VAPBO95292 243 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 CHRM5P08912 532 aaPredicted RBP10.34□□□□□ -0.75
DDX39A-203ENST00000454233 MSL3P1P0C860 447 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 PVRP15151 417 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 UGT2B7P16662 529 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 PAMP19021 973 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 CYP2A7P20853 494 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 AOAHP28039 575 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 COILP38432 576 aaPredicted RBP10.34□□□□□ -0.75
DDX39A-203ENST00000454233 EIF3BP55884 814 aaKnown RBP10.34□□□□□ -0.75
DDX39A-203ENST00000454233 ERV3-1Q14264 604 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 KCNJ11Q14654 390 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 ATP1A1-AS1Q5TC04 95 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 TTC27Q6P3X3 843 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 CASC4Q6P4E1 433 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 TTC23LQ6PF05 361 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 CES3Q6UWW8 571 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 UNC5DQ6UXZ4 953 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 PRICKLE2Q7Z3G6 844 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 GPR135Q8IZ08 494 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 KRT222Q8N1A0 295 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 CFAP61Q8NHU2 1237 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 LKAAEAR1Q8TD35 194 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 MR1Q95460 341 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 CLIP3Q96DZ5 547 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 MFSD3Q96ES6 412 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 MS4A14Q96JA4 679 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 NRTNQ99748 197 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 GPR87Q9BY21 358 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 TWSG1Q9GZX9 223 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 KLHL25Q9H0H3 589 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 SOX13Q9UN79 622 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 KALRNO60229 2985 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 ZNF462Q96JM2 2506 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 A0A0J9YY10 115 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 TCRBV7S3A2A0A539 114 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 CDC14CA4D256 554 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 E7EQ34 232 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 H3BMM5 538 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 KIF5CO60282 957 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 SLCO2B1O94956 709 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 RECKO95980 971 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 HBQ1P09105 142 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 RPS3P23396 243 aaKnown RBP eCLIP10.33□□□□□ -0.76
DDX39A-203ENST00000454233 PTPN4P29074 926 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 MAGEA6P43360 314 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 RAB28P51157 221 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 ITGA1P56199 1179 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 ABRQ12979 859 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 GPS2Q13227 327 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 KIR2DS3Q14952 304 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 RNF187Q5TA31 235 aaPredicted RBP10.33□□□□□ -0.76
DDX39A-203ENST00000454233 KIAA0930Q6ICG6 404 aaPredicted RBP10.33□□□□□ -0.76
DDX39A-203ENST00000454233 FAM199XQ6PEV8 388 aaPredicted RBP10.33□□□□□ -0.76
DDX39A-203ENST00000454233 CCDC137Q6PK04 289 aaKnown RBP10.33□□□□□ -0.76
DDX39A-203ENST00000454233 OTOAQ7RTW8 1153 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 TRIM73Q86UV7 250 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 VRK3Q8IV63 474 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 DCUN1D3Q8IWE4 304 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 REXO1L1PQ8IX06 675 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 SLC35F6Q8N357 371 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 C19orf47Q8N9M1 422 aaKnown RBP10.33□□□□□ -0.76
DDX39A-203ENST00000454233 OR1L3Q8NH93 324 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 C9orf43Q8TAL5 461 aaPredicted RBP10.33□□□□□ -0.76
DDX39A-203ENST00000454233 GRK7Q8WTQ7 553 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 SKA2Q8WVK7 121 aaPredicted RBP10.33□□□□□ -0.76
DDX39A-203ENST00000454233 ANP32BQ92688 251 aaKnown RBP10.33□□□□□ -0.76
DDX39A-203ENST00000454233 TCTN2Q96GX1 697 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 LRFN5Q96NI6 719 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 OR2A14Q96R47 310 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 TCF12Q99081 682 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 P2RY12Q9H244 342 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 ACTL8Q9H568 366 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 ACTR5Q9H9F9 607 aaPredicted RBP10.33□□□□□ -0.76
DDX39A-203ENST00000454233 XAB2Q9HCS7 855 aaKnown RBP10.33□□□□□ -0.76
DDX39A-203ENST00000454233 PLAGL1Q9UM63 463 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 CDYLQ9Y232 598 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 FARSAQ9Y285 508 aaKnown RBP10.33□□□□□ -0.76
DDX39A-203ENST00000454233 MRFAP1Q9Y605 127 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 SPTA1P02549 2419 aa10.33□□□□□ -0.76
DDX39A-203ENST00000454233 MAGEB16A2A368 324 aa10.32□□□□□ -0.76
DDX39A-203ENST00000454233 SDR42E2A6NKP2 422 aa10.32□□□□□ -0.76
DDX39A-203ENST00000454233 MEN1O00255 615 aa10.32□□□□□ -0.76
DDX39A-203ENST00000454233 AVILO75366 819 aa10.32□□□□□ -0.76
DDX39A-203ENST00000454233 MLNP12872 115 aa10.32□□□□□ -0.76
DDX39A-203ENST00000454233 OGNP20774 298 aaKnown RBP10.32□□□□□ -0.76
DDX39A-203ENST00000454233 PKLRP30613 574 aa10.32□□□□□ -0.76
DDX39A-203ENST00000454233 FNTAP49354 379 aa10.32□□□□□ -0.76
DDX39A-203ENST00000454233 CYP1B1Q16678 543 aa10.32□□□□□ -0.76
DDX39A-203ENST00000454233 KYNUQ16719 465 aa10.32□□□□□ -0.76
DDX39A-203ENST00000454233 KCTD19Q17RG1 926 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms